Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 98.95 | 97.01 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 98.0 | 96.7 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 97.23 | 92.81 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 93.51 | 91.59 |
| EER90476 | Sorghum | cytosol | 93.51 | 91.5 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.48 | 87.04 |
| Zm00001d034914_P037 | Maize | cytosol | 92.18 | 86.1 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 85.31 | 83.16 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 84.83 | 82.62 |
| KRH24046 | Soybean | cytosol, nucleus | 83.59 | 81.34 |
| KRH29017 | Soybean | cytosol, nucleus | 83.3 | 81.06 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 83.11 | 81.02 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 85.5 | 80.94 |
| CDX70734 | Canola | cytosol | 68.51 | 80.76 |
| CDY69253 | Canola | cytosol, plasma membrane | 49.14 | 80.59 |
| Zm00001d012815_P022 | Maize | cytosol | 88.45 | 80.54 |
| KRH27740 | Soybean | cytosol | 82.16 | 80.39 |
| AT5G17020.1 | Thale cress | cytosol | 82.16 | 80.09 |
| CDY02737 | Canola | cytosol | 81.97 | 79.83 |
| CDX85477 | Canola | cytosol | 81.58 | 79.46 |
| KRH77701 | Soybean | cytosol | 81.2 | 79.46 |
| CDX70730 | Canola | cytosol | 80.63 | 79.34 |
| CDX78722 | Canola | cytosol | 80.34 | 79.06 |
| CDX69407 | Canola | cytosol | 80.15 | 78.87 |
| Bra023593.1-P | Field mustard | cytosol | 81.49 | 78.49 |
| CDY16965 | Canola | cytosol | 80.53 | 78.44 |
| Bra006382.1-P | Field mustard | cytosol | 80.15 | 77.63 |
| AT3G03110.1 | Thale cress | cytosol | 78.91 | 76.86 |
| Bra008580.1-P | Field mustard | cytosol | 80.73 | 75.2 |
| CDY23464 | Canola | cytosol | 75.95 | 74.32 |
| Bra021372.1-P | Field mustard | cytosol | 76.05 | 73.93 |
| CDY49924 | Canola | cytosol | 76.24 | 72.7 |
| Bra032016.1-P | Field mustard | cytosol | 64.12 | 64.8 |
| CDY28738 | Canola | cytosol | 64.98 | 64.73 |
| CDY43150 | Canola | cytosol | 63.93 | 64.61 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.36 | 60.71 |
| CDY49926 | Canola | nucleus | 3.82 | 51.28 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 2.0 | 47.73 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.34 | 43.75 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0008536 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 |
| PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 |
| SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS5D01G568300 | EnsemblPlants:TraesCS5D01G568300.3 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:565495068..565504151
Molecular Weight (calculated)
120252.0 Da
IEP (calculated)
5.792
GRAVY (calculated)
-0.033
Length
1048 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQRWGYATTA VRSAADLILR DLQNNPDMWL QVVHILQNSQ NLNTKFFALQ VLESVIKYRW NALPVEQRDG IKNYISDVIV QLSSNEVSFR QERLYVNKLN
0101: IILVQVLKHE WPARWTSFIP DLVAAAKSSE TICENCMAIL KLLSEEIFDF SRGEMTQQKI KELKSSLNSE FRLIHELCLY VLSATQSSEL IRATLATLHA
0201: FLSWIPVGFI FESPLLETLL KFFPMAAYRN LTLQCLTEVA ALQFGDFYNV QYVKMYTFFM LQLQAILPPG TIPNAYANGS NEEQAFIQNL ALFFTAFFKN
0301: HIRILEASAE NRAALLVGLE YLIGISYVDD TEVFKVCLDY WNVFVLELFE AHNQMEPAIP AVSMIGLQAQ MIPGVDGTGT AVHQRRQLYA SPLSKLRMLM
0401: ICRMAKPEEV LIVEDENGNI VRETMKDNDV LVQYKIMRET LIYLSHLDHE DTEQQMLKKL TKQLNGEDWS WNNLNTLCWA IGSISGSMVE EQENRFLVMV
0501: IRDLLNLCEI TKGKDNKAVI ASNIMYVVGQ YPRFLRAHWK FLKTVVNKLF EFMHEMHPGV QDMACDTFLK IVQKCKRKFV TQQVGENEPF VSELLTNLAT
0601: TILDLEPHQI HTFYESVGHM IQAESDNTKR DEYLKRLMSL PNQKWAEIIG QAGQSIDILK NQDVIRSVLN ILQTNTSVAT SLGPHFFPQI SLIFLDMLTV
0701: YRMYSELVSS TIAEGGPYAS KSSFVKLLRS IKRETLKLIE TFVDKAEDLP HLGKQFVPPM MDPILGDYAR NVPDARESEV LSLFATIINK YKAEMLDDVP
0801: RIFEAVFQCT LEMITKNFED YPEHRLKFFS LLRAIGTHCF KALIQLSSQQ LKLVIDSINW AFRHTERNIA ETGLSLLLEI LKNFQASEFT NQFYKTYFLT
0901: IEQEIFAVLT DSFHKPGFKL HVLVLQHLFC VVDGLTEPLW DASTVSYPSN AMFVRDYTIK LLGASFPNMT AAEVTKFVDG LLGSRHDLPS FKNHIRDFLV
1001: QSKEFSAQDN KDLYAEEAAV QREKERQRML AIPGLIAPSE LQDEMVDS
0101: IILVQVLKHE WPARWTSFIP DLVAAAKSSE TICENCMAIL KLLSEEIFDF SRGEMTQQKI KELKSSLNSE FRLIHELCLY VLSATQSSEL IRATLATLHA
0201: FLSWIPVGFI FESPLLETLL KFFPMAAYRN LTLQCLTEVA ALQFGDFYNV QYVKMYTFFM LQLQAILPPG TIPNAYANGS NEEQAFIQNL ALFFTAFFKN
0301: HIRILEASAE NRAALLVGLE YLIGISYVDD TEVFKVCLDY WNVFVLELFE AHNQMEPAIP AVSMIGLQAQ MIPGVDGTGT AVHQRRQLYA SPLSKLRMLM
0401: ICRMAKPEEV LIVEDENGNI VRETMKDNDV LVQYKIMRET LIYLSHLDHE DTEQQMLKKL TKQLNGEDWS WNNLNTLCWA IGSISGSMVE EQENRFLVMV
0501: IRDLLNLCEI TKGKDNKAVI ASNIMYVVGQ YPRFLRAHWK FLKTVVNKLF EFMHEMHPGV QDMACDTFLK IVQKCKRKFV TQQVGENEPF VSELLTNLAT
0601: TILDLEPHQI HTFYESVGHM IQAESDNTKR DEYLKRLMSL PNQKWAEIIG QAGQSIDILK NQDVIRSVLN ILQTNTSVAT SLGPHFFPQI SLIFLDMLTV
0701: YRMYSELVSS TIAEGGPYAS KSSFVKLLRS IKRETLKLIE TFVDKAEDLP HLGKQFVPPM MDPILGDYAR NVPDARESEV LSLFATIINK YKAEMLDDVP
0801: RIFEAVFQCT LEMITKNFED YPEHRLKFFS LLRAIGTHCF KALIQLSSQQ LKLVIDSINW AFRHTERNIA ETGLSLLLEI LKNFQASEFT NQFYKTYFLT
0901: IEQEIFAVLT DSFHKPGFKL HVLVLQHLFC VVDGLTEPLW DASTVSYPSN AMFVRDYTIK LLGASFPNMT AAEVTKFVDG LLGSRHDLPS FKNHIRDFLV
1001: QSKEFSAQDN KDLYAEEAAV QREKERQRML AIPGLIAPSE LQDEMVDS
001: MDDLEQAIVI SFETGAVDSA LKSQAVTYCQ QIKETPSICS ICIEKLWFSK LVQVQFWCLQ TLQDVLRVKY GSMSLDEQSY VRKSVFSMAC LEVIDNENAG
101: RVVEGPPFVK NKLAQVLATL IYYEYPLIWS SVFLDFMLHL CKGAVVIDMF CRVLNALDDE LISLDYPRTP EEISVAARVK DAMRQQCVPQ IARAWYDIVS
201: MYKNSDPDLS ATVLDCMRRF VSWIDIGLVA NDAFVPLLFE LILSDGLSEQ VRGAAAGCVL AMVSKRMDPQ SKLPLLQTLQ ISRVFGLVSG DVDSDLVSKV
301: SALLTGYAVE VLECHKRLNS EDTKAVSMDL LNEVLPSVFY VMQKCEVDST FSIVQFLLGY VSTLKGLPAL KEKQLLHITQ ILEVIRIQIC YDPMYRNNLN
401: SLDKTGLEEE DRMSEFRKDL FVLLRTVGRV APEVTQHFIR NSLANAVESS SESNVEEVEA ALSLLYSFGE SMTEEAMKTG SGCLSELIPM LLTTQFPGHS
501: HRLVALVYLE NITRYMKFIQ ENSQYIPNVL GAFLDDRGLH HQNFYVSRRA GYLFMRVVKL LKSKLVPFID KILQNLQDTL SQLTTMNFAS RELTGTEDGS
601: HIFEAIGIII GLEDVPAEKQ SDYLSLLLTP LCQQIEAGLV QAKVASSEDF PVKIANIQFA IVAINALSKG FNERLVTASR PGIGLMFKQT LDVLLRVLIE
701: FPKVEPLRSK VTSFIHRMVD TLGSAVFPYL PKALEQLLAD SEPKEMVGFM VLLNQLICKF NSALHDILEE VYPVVAVRIF NVIPRDGLPS RPGAVTEEMR
801: ELIELQRMLY TFLHVIATHD LSSVFLTPKS RAYLDPMMQL VLNTSCNHKD ITVRKACVQI FIKLIKDWCA EPYSEEKVPG FQNFVIEAFA TNCCLYSVLD
901: KSFNFSDANT HALFGEIITA QKVMYEKFGN TFLMHLMSKS FPSAHIPQDL AEQYCQKLQG NDIRSLKSYY QSLIENLRLQ QNGSHVFR
101: RVVEGPPFVK NKLAQVLATL IYYEYPLIWS SVFLDFMLHL CKGAVVIDMF CRVLNALDDE LISLDYPRTP EEISVAARVK DAMRQQCVPQ IARAWYDIVS
201: MYKNSDPDLS ATVLDCMRRF VSWIDIGLVA NDAFVPLLFE LILSDGLSEQ VRGAAAGCVL AMVSKRMDPQ SKLPLLQTLQ ISRVFGLVSG DVDSDLVSKV
301: SALLTGYAVE VLECHKRLNS EDTKAVSMDL LNEVLPSVFY VMQKCEVDST FSIVQFLLGY VSTLKGLPAL KEKQLLHITQ ILEVIRIQIC YDPMYRNNLN
401: SLDKTGLEEE DRMSEFRKDL FVLLRTVGRV APEVTQHFIR NSLANAVESS SESNVEEVEA ALSLLYSFGE SMTEEAMKTG SGCLSELIPM LLTTQFPGHS
501: HRLVALVYLE NITRYMKFIQ ENSQYIPNVL GAFLDDRGLH HQNFYVSRRA GYLFMRVVKL LKSKLVPFID KILQNLQDTL SQLTTMNFAS RELTGTEDGS
601: HIFEAIGIII GLEDVPAEKQ SDYLSLLLTP LCQQIEAGLV QAKVASSEDF PVKIANIQFA IVAINALSKG FNERLVTASR PGIGLMFKQT LDVLLRVLIE
701: FPKVEPLRSK VTSFIHRMVD TLGSAVFPYL PKALEQLLAD SEPKEMVGFM VLLNQLICKF NSALHDILEE VYPVVAVRIF NVIPRDGLPS RPGAVTEEMR
801: ELIELQRMLY TFLHVIATHD LSSVFLTPKS RAYLDPMMQL VLNTSCNHKD ITVRKACVQI FIKLIKDWCA EPYSEEKVPG FQNFVIEAFA TNCCLYSVLD
901: KSFNFSDANT HALFGEIITA QKVMYEKFGN TFLMHLMSKS FPSAHIPQDL AEQYCQKLQG NDIRSLKSYY QSLIENLRLQ QNGSHVFR
Arabidopsis Description
PSDExportin-T [Source:UniProtKB/Swiss-Prot;Acc:Q7PC79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.