Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43150 | Canola | cytosol | 91.64 | 92.96 |
| CDY23464 | Canola | cytosol | 73.19 | 71.9 |
| AT3G03110.1 | Thale cress | cytosol | 73.0 | 71.38 |
| CDX69407 | Canola | cytosol | 71.2 | 70.33 |
| CDY49924 | Canola | cytosol | 73.38 | 70.25 |
| CDX70730 | Canola | cytosol | 70.72 | 69.86 |
| CDY02737 | Canola | cytosol | 71.2 | 69.61 |
| CDX78722 | Canola | cytosol | 70.44 | 69.58 |
| CDY16965 | Canola | cytosol | 71.01 | 69.42 |
| CDX85477 | Canola | cytosol | 70.82 | 69.24 |
| KRH27740 | Soybean | cytosol | 69.68 | 68.44 |
| KRH24046 | Soybean | cytosol, nucleus | 69.68 | 68.06 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 69.58 | 68.03 |
| KRH77701 | Soybean | cytosol | 69.2 | 67.97 |
| KRH29017 | Soybean | cytosol, nucleus | 69.58 | 67.97 |
| CDX70734 | Canola | cytosol | 57.32 | 67.83 |
| CDY69253 | Canola | cytosol, plasma membrane | 41.06 | 67.61 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 69.01 | 67.53 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 68.25 | 66.79 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 67.87 | 66.73 |
| EER90476 | Sorghum | cytosol | 67.78 | 66.57 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 66.83 | 66.2 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 66.73 | 65.67 |
| EER98405 | Sorghum | cytosol | 66.25 | 65.32 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 64.73 | 64.98 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 3.33 | 64.81 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 68.06 | 64.68 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 66.92 | 64.12 |
| Zm00001d034914_P037 | Maize | cytosol | 67.21 | 63.01 |
| Zm00001d012815_P022 | Maize | cytosol | 66.16 | 60.47 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.62 | 53.12 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 9.51 | 51.02 |
| CDY49926 | Canola | nucleus | 2.76 | 37.18 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 0.95 | 22.73 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | GO:A0A078GVQ3 | UniProt:A0A078GVQ3 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY28738 | ProteinID:CDY28738 | ProteinID:CDY28738.1 | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008536 | EnsemblPlantsGene:GSBRNA2T00041376001 | InterPro:IPR001494 |
| InterPro:IPR011989 | InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 | PFscan:PS50166 |
| PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 | SUPFAM:SSF48371 | UniParc:UPI0004EE905E |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng06240DBnaCnng06240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVQ3]
Coordinates
chrLK032225:+:487146..493485
Molecular Weight (calculated)
121366.0 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.058
Length
1052 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAERLRDLS KPMDVALLDA TVDFFYATGS KEERAAADNI LRDLKANPDT WLQVAHILQN TRSTHTKYFA LQVLEGVIKY RWKALPVVQR DGMKMYISDV
0101: IVQLSKNEES FRSERFYINK LNLILVQILK HEWPANWRSF IPDLVNAAKT SESICENGMA ILKLLSEEIF NFSKGEMIQR KINDLKDEFK FIHELCLYVL
0201: SASKRPALIR ATLSALHAYL SWIPLPYIFQ SPLLETLLTF FSVPAYRNLT LQCLSKVAAL KYEKHYRNQV VQMYMIFMKH LEGMLPFNIN IPEAYSAGSN
0301: EEQASLLRAN ILYFTAFIQN LALFFTSFFK LHINILETTS ETIPFLLAGL EYLIKISYVD DTEVFKVCCD YWHLLVSELF TSGQRMVFHP PTVGSIEPEI
0401: TTPKILYSDQ LSKLRGLMIN SMAKPEEVLI VEDENGNIVR ETMKDCDVFL QYKIMRETLI FLTHFDNDDT ERQMLSKLSK QINKKEWTRN DLNTLCWAIG
0501: SISGSMDVAN EDRFLVKVIR ALLSFSGIMK GNDDKDVIAS NIMYVFGQYP RFLKGNWQYM MVVVKKLFDF MHSTQPGVKD MACDTFLKIA QQCKRIFLVV
0601: QVGKEEPFVS EVLASLSTTT KHLGPHQIQT FYESVACIIE AESDPQKRRE YIKWLMALPN QRWAEIIGEA RQNVDFLKDP DVIHNVLTIL QTNTRVAASL
0701: GKYFLFQISS IFLAILNIYK MYSELVSSSI GDSGPCASRI SLIKLLRSVK REILNLIKTF LDKDEKNPHI GKHFVPPIMN EILADYARNV PDARESEVLS
0801: LFATIINQYK VAMQDDVPRI FESVFHCTLE MITKNFEDYP EHRLKFFLLL RAIATFCFRA LLQLSSEQLK LVMDSVIWAF RHTERNIAET GLKLLLVLLK
0901: KFQKSAFSNQ FYRTYLMQIE QEIIAVLTDT FHKPEFHWHV FVLQRLFQLV ESGALTEPLW DASTVPQQYP DNAAFVCDHT TKLLSSSFPN ISVPEVTEFV
1001: KGLYELRDHP VPFKNNVRDF LIRSKEFSAQ DNKDLDAGPI APDENPDEMS DS
0101: IVQLSKNEES FRSERFYINK LNLILVQILK HEWPANWRSF IPDLVNAAKT SESICENGMA ILKLLSEEIF NFSKGEMIQR KINDLKDEFK FIHELCLYVL
0201: SASKRPALIR ATLSALHAYL SWIPLPYIFQ SPLLETLLTF FSVPAYRNLT LQCLSKVAAL KYEKHYRNQV VQMYMIFMKH LEGMLPFNIN IPEAYSAGSN
0301: EEQASLLRAN ILYFTAFIQN LALFFTSFFK LHINILETTS ETIPFLLAGL EYLIKISYVD DTEVFKVCCD YWHLLVSELF TSGQRMVFHP PTVGSIEPEI
0401: TTPKILYSDQ LSKLRGLMIN SMAKPEEVLI VEDENGNIVR ETMKDCDVFL QYKIMRETLI FLTHFDNDDT ERQMLSKLSK QINKKEWTRN DLNTLCWAIG
0501: SISGSMDVAN EDRFLVKVIR ALLSFSGIMK GNDDKDVIAS NIMYVFGQYP RFLKGNWQYM MVVVKKLFDF MHSTQPGVKD MACDTFLKIA QQCKRIFLVV
0601: QVGKEEPFVS EVLASLSTTT KHLGPHQIQT FYESVACIIE AESDPQKRRE YIKWLMALPN QRWAEIIGEA RQNVDFLKDP DVIHNVLTIL QTNTRVAASL
0701: GKYFLFQISS IFLAILNIYK MYSELVSSSI GDSGPCASRI SLIKLLRSVK REILNLIKTF LDKDEKNPHI GKHFVPPIMN EILADYARNV PDARESEVLS
0801: LFATIINQYK VAMQDDVPRI FESVFHCTLE MITKNFEDYP EHRLKFFLLL RAIATFCFRA LLQLSSEQLK LVMDSVIWAF RHTERNIAET GLKLLLVLLK
0901: KFQKSAFSNQ FYRTYLMQIE QEIIAVLTDT FHKPEFHWHV FVLQRLFQLV ESGALTEPLW DASTVPQQYP DNAAFVCDHT TKLLSSSFPN ISVPEVTEFV
1001: KGLYELRDHP VPFKNNVRDF LIRSKEFSAQ DNKDLDAGPI APDENPDEMS DS
0001: MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
Arabidopsis Description
XPO1BProtein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.