Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 96.92 | 97.01 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 94.02 | 94.2 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 93.37 | 94.16 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 91.5 | 93.51 |
| Zm00001d034914_P037 | Maize | cytosol | 97.76 | 93.32 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 92.9 | 90.62 |
| EER98405 | Sorghum | cytosol | 88.7 | 89.03 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.48 | 88.89 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 87.21 | 86.88 |
| Zm00001d012815_P022 | Maize | cytosol | 93.18 | 86.71 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 86.55 | 86.15 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 87.58 | 84.73 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 84.97 | 84.65 |
| KRH24046 | Soybean | cytosol, nucleus | 85.06 | 84.59 |
| KRH29017 | Soybean | cytosol, nucleus | 84.97 | 84.49 |
| KRH27740 | Soybean | cytosol | 84.03 | 84.03 |
| KRH77701 | Soybean | cytosol | 83.47 | 83.47 |
| AT5G17020.1 | Thale cress | cytosol | 83.1 | 82.79 |
| CDY02737 | Canola | cytosol | 82.54 | 82.16 |
| CDX85477 | Canola | cytosol | 82.35 | 81.97 |
| CDX70730 | Canola | cytosol | 81.23 | 81.69 |
| CDX69407 | Canola | cytosol | 81.05 | 81.5 |
| CDX78722 | Canola | cytosol | 80.86 | 81.31 |
| CDY16965 | Canola | cytosol | 81.61 | 81.23 |
| Bra023593.1-P | Field mustard | cytosol | 82.26 | 80.97 |
| CDX70734 | Canola | cytosol | 67.04 | 80.76 |
| CDY69253 | Canola | cytosol, plasma membrane | 48.18 | 80.75 |
| AT3G03110.1 | Thale cress | cytosol | 80.67 | 80.3 |
| Bra006382.1-P | Field mustard | cytosol | 80.67 | 79.85 |
| Bra008580.1-P | Field mustard | cytosol | 81.7 | 77.78 |
| CDY23464 | Canola | cytosol | 77.4 | 77.4 |
| Bra021372.1-P | Field mustard | cytosol | 77.5 | 76.99 |
| CDY49924 | Canola | cytosol | 77.59 | 75.61 |
| Bra032016.1-P | Field mustard | cytosol | 65.64 | 67.79 |
| CDY28738 | Canola | cytosol | 66.57 | 67.78 |
| CDY43150 | Canola | cytosol | 65.55 | 67.7 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.39 | 62.24 |
| CDY49926 | Canola | nucleus | 3.73 | 51.28 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 2.05 | 50.0 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.31 | 43.75 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | EntrezGene:8059248 | InterPro:ARM-like | InterPro:ARM-type_fold | UniProt:C5WRW8 |
| InterPro:CRM1_C_dom | EnsemblPlants:EER90476 | ProteinID:EER90476 | ProteinID:EER90476.1 | InterPro:Exportin-1/Importin-b-like | GO:GO:0000055 |
| GO:GO:0000056 | GO:GO:0003674 | GO:GO:0005049 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0046825 | InterPro:IPR001494 | InterPro:IPR011989 |
| InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 |
| PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 | EnsemblPlantsGene:SORBI_3001G004400 | SUPFAM:SSF48371 | unigene:Sbi.858 |
| UniParc:UPI0001A8245C | RefSeq:XP_002463478.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:380347..391045
Molecular Weight (calculated)
123024.0 Da
IEP (calculated)
5.318
GRAVY (calculated)
-0.071
Length
1071 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEKLRDLSQ PIDVTLLDAT VAAFYGTGSK EERSAADQIL RDLQNNPDMW LQVVHILQNS QNLNTKFFAL QVLESVIKYR WNALPVEQRD GIKNYISDVI
0101: VQLSSNEVTF RQERLYVNKL NIILVQVLKH EWPSRWSSFI PDLVAAAKSS ETICENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQRPE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKMYTFF MIQLQAILPP EKIPDAYANG
0301: STEEQAFIQN LALFFTSFFK NHMRILEITQ ENAAALLMGL EYLIGISYVD DTEVFKVCLD YWNVFVLELF EAHNQMEPAA TVSMMGLQAQ MVPGMVDGTG
0401: TAVQQRRQLY SGPLSKLRML MICRMAKPEE VLIVEDENGN IVRETMKDND VLVQYKIMRE TLIYLSHLDH EDTEQQMLKK LSKQLNGEDW SWNNLNTLCW
0501: AIGSISGSMV EEQENRFLVM VIRDLLNLCE ITKGKDNKAV IASNIMYVVG QYPRFLRAHW KFLKTVVNKL FEFMHEMHPG VQDMACDTFL KIVQKCKRKF
0601: VTQQVGENEP FVSELLSNLA TTIADLEPHQ IHTFYESVGH MIQAESDNTK RDEYLKRLMS LPNQKWAEII GQASQSIDIL KNQDVIRSVL NILQTNTSVA
0701: SSLGPHFFPQ ISLIFLDMLT VYRMYSELVS STIAEGGPFA SRTSFVKLLR SVKRETLKLI ETFVDKAEDL PHIGKQFVPP MMDPVLGDYA RNVPDARESE
0801: VLSLFATIIN KYKGEMLEDV PRIFEAVFQC TLEMITKNFE DYPEHRLKFF SLLRAIGTHC FQALIQLSSP QLKLVIDSIN WAFRHTERNI AETGLSLLLE
0901: ILKNFQASGF QNQFYKTYFL TIEQEIFAVL TDTFHKPGFK LHVLVLQHLF CVVDGLTEPL WDASSVPYQY TDNAMFVRDY TIKLLGTSFP NMTVTEVTKF
1001: VDGLLSSKHD LPSFKNHIRD FLVQSKEFSA QDNKDLYAEE AAAQRERERQ RMLAIPGLIA PSELQDEMVD S
0101: VQLSSNEVTF RQERLYVNKL NIILVQVLKH EWPSRWSSFI PDLVAAAKSS ETICENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQRPE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKMYTFF MIQLQAILPP EKIPDAYANG
0301: STEEQAFIQN LALFFTSFFK NHMRILEITQ ENAAALLMGL EYLIGISYVD DTEVFKVCLD YWNVFVLELF EAHNQMEPAA TVSMMGLQAQ MVPGMVDGTG
0401: TAVQQRRQLY SGPLSKLRML MICRMAKPEE VLIVEDENGN IVRETMKDND VLVQYKIMRE TLIYLSHLDH EDTEQQMLKK LSKQLNGEDW SWNNLNTLCW
0501: AIGSISGSMV EEQENRFLVM VIRDLLNLCE ITKGKDNKAV IASNIMYVVG QYPRFLRAHW KFLKTVVNKL FEFMHEMHPG VQDMACDTFL KIVQKCKRKF
0601: VTQQVGENEP FVSELLSNLA TTIADLEPHQ IHTFYESVGH MIQAESDNTK RDEYLKRLMS LPNQKWAEII GQASQSIDIL KNQDVIRSVL NILQTNTSVA
0701: SSLGPHFFPQ ISLIFLDMLT VYRMYSELVS STIAEGGPFA SRTSFVKLLR SVKRETLKLI ETFVDKAEDL PHIGKQFVPP MMDPVLGDYA RNVPDARESE
0801: VLSLFATIIN KYKGEMLEDV PRIFEAVFQC TLEMITKNFE DYPEHRLKFF SLLRAIGTHC FQALIQLSSP QLKLVIDSIN WAFRHTERNI AETGLSLLLE
0901: ILKNFQASGF QNQFYKTYFL TIEQEIFAVL TDTFHKPGFK LHVLVLQHLF CVVDGLTEPL WDASSVPYQY TDNAMFVRDY TIKLLGTSFP NMTVTEVTKF
1001: VDGLLSSKHD LPSFKNHIRD FLVQSKEFSA QDNKDLYAEE AAAQRERERQ RMLAIPGLIA PSELQDEMVD S
0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
Arabidopsis Description
XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.