Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 99.53 | 98.88 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 96.7 | 98.0 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 99.25 | 95.99 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 94.35 | 93.64 |
| EER90476 | Sorghum | cytosol | 94.16 | 93.37 |
| Zm00001d034914_P037 | Maize | cytosol | 92.75 | 87.79 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.43 | 87.04 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 86.25 | 85.21 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 85.78 | 84.67 |
| KRH24046 | Soybean | cytosol, nucleus | 84.65 | 83.47 |
| KRH29017 | Soybean | cytosol, nucleus | 84.46 | 83.29 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 84.28 | 83.26 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 86.35 | 82.84 |
| KRH27740 | Soybean | cytosol | 83.33 | 82.63 |
| Zm00001d012815_P022 | Maize | cytosol | 89.55 | 82.62 |
| AT5G17020.1 | Thale cress | cytosol | 83.33 | 82.33 |
| CDY02737 | Canola | cytosol | 82.96 | 81.88 |
| CDX70730 | Canola | cytosol | 82.02 | 81.78 |
| KRH77701 | Soybean | cytosol | 82.39 | 81.7 |
| CDX85477 | Canola | cytosol | 82.58 | 81.51 |
| CDX78722 | Canola | cytosol | 81.64 | 81.41 |
| CDX69407 | Canola | cytosol | 81.45 | 81.22 |
| CDY16965 | Canola | cytosol | 81.64 | 80.58 |
| CDX70734 | Canola | cytosol | 67.42 | 80.54 |
| Bra023593.1-P | Field mustard | cytosol | 82.49 | 80.51 |
| CDY69253 | Canola | cytosol, plasma membrane | 48.31 | 80.28 |
| Bra006382.1-P | Field mustard | cytosol | 81.45 | 79.94 |
| AT3G03110.1 | Thale cress | cytosol | 79.94 | 78.9 |
| Bra008580.1-P | Field mustard | cytosol | 81.73 | 77.16 |
| CDY23464 | Canola | cytosol | 76.84 | 76.19 |
| Bra021372.1-P | Field mustard | cytosol | 76.93 | 75.79 |
| CDY49924 | Canola | cytosol | 77.12 | 74.52 |
| Bra032016.1-P | Field mustard | cytosol | 65.25 | 66.83 |
| CDY28738 | Canola | cytosol | 66.2 | 66.83 |
| CDY43150 | Canola | cytosol | 65.16 | 66.73 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.21 | 60.71 |
| CDY49926 | Canola | nucleus | 3.77 | 51.28 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.32 | 43.75 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 1.69 | 40.91 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0008536 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 |
| PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 |
| SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS5B01G561500 | EnsemblPlants:TraesCS5B01G561500.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:707699209..707708911
Molecular Weight (calculated)
121691.0 Da
IEP (calculated)
5.500
GRAVY (calculated)
-0.044
Length
1062 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEKLRDLSQ PIDVPVLDAT VAAFYGTGSK EERSAADLIL RDLQNNPDMW LQVVHILQNS QNLNTKFFAL QVLESVIKYR WNALPVEQRD GIKNYISDVI
0101: VQLSSNEVSF RQERLYVNKL NIILVQVLKH EWPARWTSFI PDLVAAAKSS ETICENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQSSE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKMYTFF MLQLQAILPP GTIPNAYANG
0301: SNEEQAFIQN LALFFTAFFK NHIRILEASA ENRAALLVGL EYLIGISYVD DTEVFKVCLD YWNVFVLELF EAHNQMEPAI PAAQMIPGVD GTGTAVHQRR
0401: QLYASPLSKL RMLMICRMAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEQQM LKKLTKQLNG EDWSWNNLNT LCWAIGSISG
0501: SMVEEQENRF LVMVIRDLLN LCEITKGKDN KAVIASNIMY VVGQYPRFLR AHWKFLKTVV NKLFEFMHEM HPGVQDMACD TFLKIVQKCK RKFVTQQVGE
0601: NEPFVSELLT NLATTILDLE PHQIHTFYES VGHMIQAESD NTKRDEYLKR LMSLPNQKWA EIIGQAGQSI DILKNQDVIR SVLNILQTNT SVATSLGPHF
0701: FPQISLIFLD MLTVYRMYSE LVSSTIAEGG PYASKSSFVK LLRSIKRETL KLIETFVDKA EDLPHLGKQF VPPMMDPILG DYARNVPDAR ESEVLSLFAT
0801: IINKYKAEML DDVPRIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIG THCFKALIQL SSQQLKLVID SINWAFRHTE RNIAETGLSL LLEILKNFQA
0901: SEFTNQFYKT YFLTIEQEIF AVLTDSFHKP GFKLHVLVLQ HLFCVVDGLT EPLWDASTVS YPSNAMFVRD YTIKLLGASF PNMTAAEVTK FVDGLLGSRH
1001: DLPSFKNHIR DFLVQSKEFS AQDNKDLYAE EAAVQREKER QRMLAIPGLI APSELQDEMV DS
0101: VQLSSNEVSF RQERLYVNKL NIILVQVLKH EWPARWTSFI PDLVAAAKSS ETICENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQSSE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKMYTFF MLQLQAILPP GTIPNAYANG
0301: SNEEQAFIQN LALFFTAFFK NHIRILEASA ENRAALLVGL EYLIGISYVD DTEVFKVCLD YWNVFVLELF EAHNQMEPAI PAAQMIPGVD GTGTAVHQRR
0401: QLYASPLSKL RMLMICRMAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEQQM LKKLTKQLNG EDWSWNNLNT LCWAIGSISG
0501: SMVEEQENRF LVMVIRDLLN LCEITKGKDN KAVIASNIMY VVGQYPRFLR AHWKFLKTVV NKLFEFMHEM HPGVQDMACD TFLKIVQKCK RKFVTQQVGE
0601: NEPFVSELLT NLATTILDLE PHQIHTFYES VGHMIQAESD NTKRDEYLKR LMSLPNQKWA EIIGQAGQSI DILKNQDVIR SVLNILQTNT SVATSLGPHF
0701: FPQISLIFLD MLTVYRMYSE LVSSTIAEGG PYASKSSFVK LLRSIKRETL KLIETFVDKA EDLPHLGKQF VPPMMDPILG DYARNVPDAR ESEVLSLFAT
0801: IINKYKAEML DDVPRIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIG THCFKALIQL SSQQLKLVID SINWAFRHTE RNIAETGLSL LLEILKNFQA
0901: SEFTNQFYKT YFLTIEQEIF AVLTDSFHKP GFKLHVLVLQ HLFCVVDGLT EPLWDASTVS YPSNAMFVRD YTIKLLGASF PNMTAAEVTK FVDGLLGSRH
1001: DLPSFKNHIR DFLVQSKEFS AQDNKDLYAE EAAVQREKER QRMLAIPGLI APSELQDEMV DS
0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
Arabidopsis Description
XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.