Factsheet for Os01t0924900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 18022940
nucleus: 19621931
nucleus: 26035336

msms PMID: 18022940 doi

F Tan, G Li, BR Chitteti, Z Peng

Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G436900.1	Wheat	nucleus	55.6	60.6
TraesCS3D01G429200.1	Wheat	nucleus	58.55	60.57
TraesCS3B01G471100.1	Wheat	nucleus	53.63	55.49
EES01993	Sorghum	nucleus	53.83	54.04
HORVU3Hr1G095450.1	Barley	plasma membrane	54.62	48.86
Zm00001d042302_P002	Maize	nucleus	54.03	47.66
GSMUA_Achr10P...	Banana	nucleus	45.58	41.73
GSMUA_Achr11P...	Banana	nucleus	41.06	38.35
CDX77921	Canola	nucleus	31.43	37.56
Bra019559.1-P	Field mustard	nucleus	30.06	36.6
KRH41110	Soybean	nucleus	34.97	36.55
CDY39861	Canola	nucleus	25.74	36.29
Bra029213.1-P	Field mustard	nucleus	20.04	36.17
CDY69625	Canola	nucleus	20.63	35.96
CDY37915	Canola	nucleus	29.86	35.93
VIT_17s0000g00960.t01	Wine grape	nucleus	40.08	35.79
PGSC0003DMT400081181	Potato	nucleus	38.11	35.6
Solyc03g097490.2.1	Tomato	nucleus	36.94	34.94
KRH54152	Soybean	nucleus	37.52	34.79
CDY05865	Canola	plastid	21.81	34.69
AT3G48710.1	Thale cress	nucleus	31.43	34.63
KRH59791	Soybean	nucleus	35.56	34.41
KRH63796	Soybean	nucleus	35.95	34.21
CDY41517	Canola	nucleus	32.81	34.08
Solyc06g072660.2.1	Tomato	nucleus	34.97	33.9
Bra038644.1-P	Field mustard	nucleus	32.22	33.47
CDY62886	Canola	nucleus	31.24	32.72
AT5G63550.2	Thale cress	nucleus	33.6	32.2
PGSC0003DMT400069255	Potato	nucleus	30.06	30.91
Bra035837.1-P	Field mustard	nucleus	32.81	30.42
CDX81185	Canola	nucleus	33.2	30.18
CDY16716	Canola	nucleus	32.42	29.68
Os03t0596900-01	Rice	nucleus	27.9	20.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.2	EntrezGene:4327229	EMBL:AK067886	ProteinID:BAD88036.1	ProteinID:BAF07165.1
ProteinID:BAS75977.1	ncoils:Coil	InterPro:DEK_C	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006338	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0042393	GO:GO:2000779	EnsemblPlantsGene:Os01g0924900	EnsemblPlants:Os01t0924900-01	PFAM:PF08766
PANTHER:PTHR13468	UniProt:Q5JKH1	SUPFAM:SSF109715	UniParc:UPI00004C2B58	RefSeq:XP_015621958.1	SEG:seg

Description

brassinosteroid receptor kinase (BRI1)-interacting protein 112, BRI1-interacting protein 112, brassinosteroid receptor kinase-interacting protein 112GTP-binding signal recognition particle SRP54, G-domain containing protein. (Os01t0924900-01);Similar to BRI1-KD interacting protein 112 (Fragment). (Os01t0924900-02)

Coordinates

chr1:+:40501147..40507498

Molecular Weight (calculated)

56269.0 Da

IEP (calculated)

6.353

GRAVY (calculated)

-1.393

Length

509 amino acids

Sequence
(BLAST)

001: MASDAKPDSP PAGVDPPPPK EEAKAEKEGE GEEPQSGGRK RGRRKKGEAE KEKEKPPPAT PTIERPSRER KTVERYSELA PRVTPAKKSP AILQGSGSKL
101: KDIPNIQFKL SKRKADENLQ SLHVLMYGRK SNVHFLKRNI SQFSGFVWTD NQEKQRTRIK EKLDKFNKEK LLDFCEILDI HVSRAATKKE EVSAKLLEFL
201: ESPCITRDVV LTDDKKGKKR GRRSKGNGQA TAEGASDGKK RRKSRKQSTE AAKENDDEDD EGPADSEDAS MGEEDDEDSE AKDNAGSDEE PDEPPAKKKA
301: TDDKQTKKAK EKDATAKKAS TRPAKGVSKP SQDTEEDDEP EVELESKKVV KKVSKSSKES DVTVDKTTKK ASKSKKDEGK DGQNNNSGAL NNKARKKDAA
401: KTTNKNKGKG KGSTEAGAAP TTEELHAVVS DILKEVDFNT ATLADILRQL GTHFKMDLMD RKSEVKHIIE EVINSMSDDE EGEEDNAEDD KDKNAKEENS
501: KEDADGDEK

Best Arabidopsis Sequence Match ( AT3G48710.1 )
(BLAST)

001: MATETLELKT PQLADTVAVT EKDTETKKKD EVEKDEAMEE KGEEIDGEKV KSPVTPVSER PIRERKRTGR YVIDTPPRSS GNKPLSITQG RGTRLKEIPN
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD

Arabidopsis Description

At3g48710 [Source:UniProtKB/TrEMBL;Acc:Q9SMM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.