Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37915 | Canola | nucleus | 65.0 | 49.17 |
| CDX77921 | Canola | nucleus | 64.38 | 48.36 |
| AT3G48710.1 | Thale cress | nucleus | 63.75 | 44.16 |
| CDY39861 | Canola | nucleus | 44.06 | 39.06 |
| CDY62886 | Canola | nucleus | 46.88 | 30.86 |
| CDY41517 | Canola | nucleus | 46.88 | 30.61 |
| CDX81185 | Canola | nucleus | 48.44 | 27.68 |
| CDY16716 | Canola | nucleus | 46.88 | 26.98 |
| KRH41110 | Soybean | nucleus | 38.75 | 25.46 |
| KRH63796 | Soybean | nucleus | 41.25 | 24.67 |
| PGSC0003DMT400069255 | Potato | nucleus | 38.12 | 24.65 |
| CDY69625 | Canola | nucleus | 22.19 | 24.32 |
| KRH59791 | Soybean | nucleus | 39.06 | 23.76 |
| KRH54152 | Soybean | nucleus | 40.62 | 23.68 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 41.88 | 23.51 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 34.06 | 23.34 |
| Solyc06g072660.2.1 | Tomato | nucleus | 37.19 | 22.67 |
| EES01993 | Sorghum | nucleus | 35.62 | 22.49 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 34.38 | 22.36 |
| Solyc03g097490.2.1 | Tomato | nucleus | 37.19 | 22.12 |
| Os01t0924900-01 | Rice | nucleus | 34.69 | 21.81 |
| PGSC0003DMT400081181 | Potato | nucleus | 36.88 | 21.65 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 33.12 | 21.54 |
| GSMUA_Achr11P... | Banana | nucleus | 36.25 | 21.28 |
| GSMUA_Achr10P... | Banana | nucleus | 35.94 | 20.68 |
| Zm00001d042302_P002 | Maize | nucleus | 33.44 | 18.54 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 32.5 | 18.28 |
| CDX94304 | Canola | nucleus | 18.12 | 13.27 |
| CDY06563 | Canola | nucleus | 27.5 | 12.81 |
| CDX89318 | Canola | nucleus | 25.31 | 11.51 |
| CDY28645 | Canola | nucleus | 27.81 | 11.22 |
| CDY20754 | Canola | nucleus | 27.81 | 11.21 |
| CDY17352 | Canola | extracellular, vacuole | 28.44 | 10.99 |
| CDX97358 | Canola | nucleus | 27.19 | 7.17 |
Protein Annotations
| EnsemblPlants:CDY05865 | EnsemblPlantsGene:GSBRNA2T00121658001 | Gene3D:1.10.10.60 | GO:A0A078EUY8 | InterPro:DEK_C | PANTHER:PTHR13468 |
| PFAM:PF08766 | ProteinID:CDY05865 | ProteinID:CDY05865.1 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI0004EE32C2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC08g20420D
Coordinates
chrLK031966:+:132668..135467
Molecular Weight (calculated)
35805.5 Da
IEP (calculated)
9.755
GRAVY (calculated)
-1.050
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGANIRKKV WSTDSTNQAK PVFKATITLT VSDSAKMLKR NIGLFSGFVW SEEKQKPRAK EKLKKCIKEK LIDFCDVLDI PINKYNVKKE ELVVTVIEFL
101: VNPKATRDIV LAHSEKETKK RKKSTPKNVT CGESSDGQAP ENENGGNDDT ETEDEKDKAR EKKSTDKKIP LKGTTKKEKP APEEEKSLKG SAKSGRKSSK
201: QVDKDDSSQE KGKKQTQANG SKGQGKTSKK GKREPTTKEM HVVVAKILKE VDFNTATLSD ILRKLGNHFG VDLMHRKTEV RDIITDAINE MSDEDDGEEN
301: TEDKVEKYKE DGLTMCLNIG
101: VNPKATRDIV LAHSEKETKK RKKSTPKNVT CGESSDGQAP ENENGGNDDT ETEDEKDKAR EKKSTDKKIP LKGTTKKEKP APEEEKSLKG SAKSGRKSSK
201: QVDKDDSSQE KGKKQTQANG SKGQGKTSKK GKREPTTKEM HVVVAKILKE VDFNTATLSD ILRKLGNHFG VDLMHRKTEV RDIITDAINE MSDEDDGEEN
301: TEDKVEKYKE DGLTMCLNIG
001: MATETLELKT PQLADTVAVT EKDTETKKKD EVEKDEAMEE KGEEIDGEKV KSPVTPVSER PIRERKRTGR YVIDTPPRSS GNKPLSITQG RGTRLKEIPN
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
Arabidopsis Description
At3g48710 [Source:UniProtKB/TrEMBL;Acc:Q9SMM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.