Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004238 | Potato | cytosol | 91.84 | 58.95 |
| Solyc01g088600.2.1 | Tomato | cytosol, nucleus, plastid | 87.07 | 55.9 |
| VIT_15s0021g00530.t01 | Wine grape | cytosol | 66.33 | 42.03 |
| Bra004852.1-P | Field mustard | plastid | 56.12 | 35.64 |
| CDX74674 | Canola | plastid | 56.12 | 35.64 |
| CDY48243 | Canola | plastid | 55.78 | 35.57 |
| CDX83423 | Canola | cytosol | 55.44 | 35.36 |
| KRH66391 | Soybean | nucleus | 55.1 | 34.91 |
| Bra000357.1-P | Field mustard | cytosol | 54.42 | 34.71 |
| AT2G44640.1 | Thale cress | cytosol | 53.06 | 34.59 |
| GSMUA_Achr1P24040_001 | Banana | cytosol | 52.04 | 33.19 |
| KRH48903 | Soybean | cytosol | 53.06 | 32.5 |
| CDX95608 | Canola | cytosol | 47.28 | 30.96 |
| PGSC0003DMT400051484 | Potato | cytosol, extracellular, nucleus | 25.51 | 30.61 |
| PGSC0003DMT400051483 | Potato | endoplasmic reticulum, mitochondrion, nucleus | 2.04 | 3.43 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400004237 | EnsemblPlantsGene:PGSC0003DMG402001686 | PANTHER:PTHR34954 | PANTHER:PTHR34954:SF2 | PGSC:PGSC0003DMG402001686 | SEG:seg |
| UniParc:UPI000294B51F | UniProt:M0ZN41 | MapMan:35.1 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402001686]
Coordinates
chr1:+:68433449..68436050
Molecular Weight (calculated)
32987.3 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.343
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLTPFAYAS LPEHDVTLEA AWPELFLDHK GRYWEVPESI SLDCSSLVSE DGLRYRFGLH KNGGHPRAVD NITDEPPLSL MQGICGKAAA SYEKSKDFWR
101: IKEKKEDIII ETDKGRFYRP SYDIRLREPH AAVSGIIGGT LEAWLNNGSS SSSASRHRSP FGVDLFGSLC YTFQHGKFKE SFGDLTRVDA RLDVSSALGL
201: AKQVSKVIRK ASSNNTRDVL SSPRLELILQ QQVAGPMVFR VDSKFSLNSP TGVQLEDFVC SLNYSLKLLQ SGKVVAWYSP KRKEGMIELR LFEF
101: IKEKKEDIII ETDKGRFYRP SYDIRLREPH AAVSGIIGGT LEAWLNNGSS SSSASRHRSP FGVDLFGSLC YTFQHGKFKE SFGDLTRVDA RLDVSSALGL
201: AKQVSKVIRK ASSNNTRDVL SSPRLELILQ QQVAGPMVFR VDSKFSLNSP TGVQLEDFVC SLNYSLKLLQ SGKVVAWYSP KRKEGMIELR LFEF
001: MANLNSAIDS VFWDQNVSSP QTLEGTARSV PGEPFPLDGA RASRSHRIQQ LSLLREGFPL GIIPSLAPAS DKRLGSFSLN SLLLSPSSNN WWLGLVGQFK
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80503]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.