Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74674 | Canola | plastid | 93.93 | 93.52 |
| CDX83423 | Canola | cytosol | 89.59 | 89.59 |
| CDX95608 | Canola | cytosol | 78.96 | 81.07 |
| AT2G44640.1 | Thale cress | cytosol | 78.52 | 80.27 |
| VIT_15s0021g00530.t01 | Wine grape | cytosol | 57.7 | 57.33 |
| Solyc01g088600.2.1 | Tomato | cytosol, nucleus, plastid | 55.53 | 55.9 |
| PGSC0003DMT400004237 | Potato | cytosol | 35.57 | 55.78 |
| PGSC0003DMT400004238 | Potato | cytosol | 54.88 | 55.24 |
| KRH66391 | Soybean | nucleus | 55.31 | 54.96 |
| KRH48903 | Soybean | cytosol | 54.23 | 52.08 |
| GSMUA_Achr1P24040_001 | Banana | cytosol | 50.76 | 50.76 |
| CDY72372 | Canola | cytosol, extracellular | 5.64 | 34.21 |
Protein Annotations
| EnsemblPlants:CDY48243 | EnsemblPlantsGene:GSBRNA2T00089108001 | InterPro:DUF3769 | PANTHER:PTHR34954 | PANTHER:PTHR34954:SF2 | PFAM:PF12600 |
| ProteinID:CDY48243 | ProteinID:CDY48243.1 | SEG:seg | UniParc:UPI0004EE5045 | UniProt:A0A078IGF7 | MapMan:35.1 |
Description
BnaC04g05020DBnaC04g05020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGF7]
Coordinates
chrLK032762:+:25894..28346
Molecular Weight (calculated)
50844.1 Da
IEP (calculated)
8.429
GRAVY (calculated)
-0.340
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLSSAIDS VFWDHNLSSP QTLEGTARSV PGEPFPVDGA RASRSHRIQQ LSLLREGFPL GVIPAFAPSS DKRLGSFSLN SLLLSPSSSN WWAGLVGQFK
101: PKKLFADIKT SISKAEEWDL QLFKDTTKHI VDKSLYSVGL WTQIALGSSS SLLLSAERLG DKNGIRKKLM FVHPLEKHDL TVEAAWPDLF LDHKGRFWDV
201: PESLNFDFSS LAPETTGLQY RFGVHKSKGD PQQVNAAETS GDDAPASLFP GLCAKAAVSY KANRDLWRPK EKDDNTKEEE EDDDAPVFLP YDIRLKEPHA
301: AVSGIVGSTL AAWITGRDTK RRSPISADAF GSACCTFQKG RFSKLYGDLT RVDARVDVSS ASALAKRIFH AIRRSSGSNK TDDDASGSPR LSLIFQQQVA
401: GPIVFKVDSQ FQVGAGKYGA QMEDLIYSLN YSLRLLESGK VVAWYSPKRK EGMVELRVFE F
101: PKKLFADIKT SISKAEEWDL QLFKDTTKHI VDKSLYSVGL WTQIALGSSS SLLLSAERLG DKNGIRKKLM FVHPLEKHDL TVEAAWPDLF LDHKGRFWDV
201: PESLNFDFSS LAPETTGLQY RFGVHKSKGD PQQVNAAETS GDDAPASLFP GLCAKAAVSY KANRDLWRPK EKDDNTKEEE EDDDAPVFLP YDIRLKEPHA
301: AVSGIVGSTL AAWITGRDTK RRSPISADAF GSACCTFQKG RFSKLYGDLT RVDARVDVSS ASALAKRIFH AIRRSSGSNK TDDDASGSPR LSLIFQQQVA
401: GPIVFKVDSQ FQVGAGKYGA QMEDLIYSLN YSLRLLESGK VVAWYSPKRK EGMVELRVFE F
001: MANLNSAIDS VFWDQNVSSP QTLEGTARSV PGEPFPLDGA RASRSHRIQQ LSLLREGFPL GIIPSLAPAS DKRLGSFSLN SLLLSPSSNN WWLGLVGQFK
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80503]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.