Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83423 | Canola | cytosol | 85.3 | 83.08 |
| Bra000357.1-P | Field mustard | cytosol | 82.18 | 80.04 |
| CDY48243 | Canola | plastid | 81.07 | 78.96 |
| CDX74674 | Canola | plastid | 79.29 | 76.89 |
| AT2G44640.1 | Thale cress | cytosol | 74.16 | 73.84 |
| VIT_15s0021g00530.t01 | Wine grape | cytosol | 54.57 | 52.8 |
| Solyc01g088600.2.1 | Tomato | cytosol, nucleus, plastid | 51.22 | 50.22 |
| PGSC0003DMT400004238 | Potato | cytosol | 51.0 | 50.0 |
| KRH66391 | Soybean | nucleus | 51.22 | 49.57 |
| PGSC0003DMT400004237 | Potato | cytosol | 30.96 | 47.28 |
| KRH48903 | Soybean | cytosol | 50.33 | 47.08 |
| GSMUA_Achr1P24040_001 | Banana | cytosol | 45.88 | 44.69 |
| CDY72372 | Canola | cytosol, extracellular | 5.35 | 31.58 |
Protein Annotations
| EnsemblPlants:CDX95608 | EnsemblPlantsGene:GSBRNA2T00101479001 | PANTHER:PTHR34954 | PANTHER:PTHR34954:SF2 | ProteinID:CDX95608 | ProteinID:CDX95608.1 |
| SEG:seg | UniParc:UPI0004EEB8E7 | MapMan:35.1 | : | : | : |
Description
BnaC03g24890D
Coordinates
chrLK031890:+:215746..217558
Molecular Weight (calculated)
49609.2 Da
IEP (calculated)
8.906
GRAVY (calculated)
-0.231
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLNSAIDS VFWDQNLSSP QTLEGTARSV PGEPFPVDGA RASRSHRIQQ LSLLREGFPL GIIPAFAPSS DKRLCSFSLN SLLLSPSSSN WWLGLVGQFK
101: PKKLFTDIKA NISKAEEWDL QLFKDTTKHI VDKSLYSLGL WTQIALGSSS SLLLSAERLG EKEGLRKKLM FVHPVRIYLF ILVNIFIGLS SLAPETGLQY
201: RFGVHKSKGD PHPVNAADES GCSEVPASLM PGLCAKAAVS YKAKRDLWRP KEEEENNTED DDDDTPVFLP YDTRLKEPHA AVSGIVGSSL TAWITGRGEK
301: RSLISADAFG SACYTFQKGR FSKLYGDLTR VDARVDVSSA SALAKRIFSA VRRSKGSNKT DDDTSGSPRL SLIFQQQQCY KFAGCSLAGP IVFKVDSRFQ
401: VGEGKFGAQM EDLIYSLNYS LRLLESGKVV AWYSPMRKEG MVELRVFEF
101: PKKLFTDIKA NISKAEEWDL QLFKDTTKHI VDKSLYSLGL WTQIALGSSS SLLLSAERLG EKEGLRKKLM FVHPVRIYLF ILVNIFIGLS SLAPETGLQY
201: RFGVHKSKGD PHPVNAADES GCSEVPASLM PGLCAKAAVS YKAKRDLWRP KEEEENNTED DDDDTPVFLP YDTRLKEPHA AVSGIVGSSL TAWITGRGEK
301: RSLISADAFG SACYTFQKGR FSKLYGDLTR VDARVDVSSA SALAKRIFSA VRRSKGSNKT DDDTSGSPRL SLIFQQQQCY KFAGCSLAGP IVFKVDSRFQ
401: VGEGKFGAQM EDLIYSLNYS LRLLESGKVV AWYSPMRKEG MVELRVFEF
001: MANLNSAIDS VFWDQNVSSP QTLEGTARSV PGEPFPLDGA RASRSHRIQQ LSLLREGFPL GIIPSLAPAS DKRLGSFSLN SLLLSPSSNN WWLGLVGQFK
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80503]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.