Factsheet for AT2G44640.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83423	Canola	cytosol	82.04	80.26
Bra000357.1-P	Field mustard	cytosol	80.71	78.96
CDY48243	Canola	plastid	80.27	78.52
Bra004852.1-P	Field mustard	plastid	78.49	76.46
CDX74674	Canola	plastid	78.27	76.24
CDX95608	Canola	cytosol	73.84	74.16
VIT_15s0021g00530.t01	Wine grape	cytosol	59.65	57.97
KRH66391	Soybean	nucleus	56.98	55.39
PGSC0003DMT400004238	Potato	cytosol	56.1	55.24
Solyc01g088600.2.1	Tomato	cytosol, nucleus, plastid	56.1	55.24
PGSC0003DMT400004237	Potato	cytosol	34.59	53.06
KRH48903	Soybean	cytosol	56.32	52.92
GSMUA_Achr1P24040_001	Banana	cytosol	52.99	51.84
AT3G06960.1	Thale cress	cytosol	35.26	33.19

Protein Annotations

MapMan:35.1	EntrezGene:819072	UniProt:A0A178VX46	ProteinID:AAC27466.2	ProteinID:AEC10450.1	ArrayExpress:AT2G44640
EnsemblPlantsGene:AT2G44640	RefSeq:AT2G44640	TAIR:AT2G44640	RefSeq:AT2G44640-TAIR-G	EnsemblPlants:AT2G44640.1	TAIR:AT2G44640.1
Unigene:At.66373	InterPro:DUF3769	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	RefSeq:NP_566021.1	UniProt:O80503	ProteinID:OAP10448.1	PFAM:PF12600
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PANTHER:PTHR34954	PANTHER:PTHR34954:SF2	UniParc:UPI00000A5FEF	SEG:seg	:	:

Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80503]

Coordinates

chr2:+:18417243..18419396

Molecular Weight (calculated)

49833.5 Da

IEP (calculated)

9.166

GRAVY (calculated)

-0.237

Length

451 amino acids

Sequence
(BLAST)

001: MANLNSAIDS VFWDQNVSSP QTLEGTARSV PGEPFPLDGA RASRSHRIQQ LSLLREGFPL GIIPSLAPAS DKRLGSFSLN SLLLSPSSNN WWLGLVGQFK
101: PKKLFADIKA DISNAEEWDL QVVKDTAKHI VDKSLYSIGL WTQIALGTSS SLLLSTERLG DKNGLRNKLM LVHPLEKHDL TVEAAWPDLF LDNKGRFWDV
201: PESLNVDVSS LVPESGVRYR FGLHKSRGNP QPVNAAGVES GSDAPTSLMP GLCAKAAVSY KVNRDLWRPQ EKEGNTEEED KPVFLPYDLR LKEPHAAISG
301: IVGSSLAAWI TGRGMLVNGK KRSPISADVF GSACYTFQKG RFSKLYGDLT RVDARVDLPS AFALAKKLFH ASSNNSDDTL WSPRLNLIFQ QQVAGPIVFK
401: VDSQFQVGAA RMEDVIYSLN YSLRLLESGK IVAWYSPKRK EGMIELRVFE F

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.