Factsheet for PGSC0003DMT400064261

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400002331
PGSC0003DMT400067082

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	PGSC0003DMT400002331	AT1G35670.1	19130088
AT1G65290.1	PGSC0003DMT400067082	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060304	Potato	mitochondrion	98.47	98.47
Solyc05g056240.2.1	Tomato	mitochondrion	96.18	96.18
GSMUA_Achr10P...	Banana	cytosol	22.9	83.33
PGSC0003DMT400070136	Potato	mitochondrion	76.34	78.12
AT1G65290.1	Thale cress	mitochondrion	72.52	75.4
CDY39292	Canola	mitochondrion	67.18	72.73
KRH40273	Soybean	nucleus	69.47	71.09
KRH00953	Soybean	mitochondrion	68.7	70.31
CDX91509	Canola	mitochondrion	68.7	68.7
CDY16401	Canola	mitochondrion	68.7	68.7
Bra022484.1-P	Field mustard	mitochondrion	68.7	68.7
VIT_04s0023g00840.t01	Wine grape	mitochondrion	66.41	68.5
GSMUA_Achr8P22050_001	Banana	mitochondrion	65.65	68.25
CDY37654	Canola	mitochondrion	67.94	67.94
CDY65005	Canola	mitochondrion	67.94	67.94
Bra035355.1-P	Field mustard	mitochondrion	67.94	67.94
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	27.48	65.45
GSMUA_Achr9P17820_001	Banana	mitochondrion	62.6	65.08
GSMUA_Achr1P11200_001	Banana	mitochondrion	61.83	64.8
TraesCS1B01G249700.1	Wheat	mitochondrion	61.07	62.5
Zm00001d038057_P002	Maize	mitochondrion	59.54	61.42
EES19437	Sorghum	mitochondrion	59.54	60.94
TraesCS1D01G238200.1	Wheat	mitochondrion	60.31	60.77
Os05t0377000-01	Rice	mitochondrion	59.54	60.47
Zm00001d048163_P001	Maize	mitochondrion	58.02	58.02
EER92267	Sorghum	mitochondrion	58.02	58.02
HORVU3Hr1G095440.1	Barley	vacuole	28.24	56.06
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	28.24	56.06
Os03t0352800-01	Rice	mitochondrion	57.25	55.56
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.48	54.55
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.48	54.55
TraesCS4D01G159800.1	Wheat	mitochondrion	54.96	54.14
TraesCS4A01G146900.1	Wheat	mitochondrion	54.96	53.73
TraesCS4B01G161900.1	Wheat	mitochondrion	54.2	53.38
HORVU2Hr1G014260.1	Barley	extracellular	26.72	53.03
HORVU2Hr1G014270.1	Barley	vacuole	25.95	51.52
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	25.95	51.52
HORVU0Hr1G002040.1	Barley	vacuole	25.95	51.52
CDY07443	Canola	mitochondrion	66.41	47.54
Bra004110.1-P	Field mustard	mitochondrion	65.65	46.99
PGSC0003DMT400004235	Potato	mitochondrion	43.51	46.72
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	26.72	45.45
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	58.78	44.77
PGSC0003DMT400034738	Potato	mitochondrion	37.4	36.84
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	52.67	36.13

Protein Annotations

Gene3D:1.10.1200.10	EntrezGene:102580333	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR009081
InterPro:IPR036736	UniProt:M1CC17	HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	EnsemblPlantsGene:PGSC0003DMG400024963
PGSC:PGSC0003DMG400024963	EnsemblPlants:PGSC0003DMT400064261	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863
PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniParc:UPI000296B7FD	RefSeq:XP_006339863.1

Description

Acyl carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024963]

Coordinates

chr2:+:43433847..43434463

Molecular Weight (calculated)

14832.7 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.285

Length

131 amino acids

Sequence
(BLAST)

001: MAAKNALLKY LRVESRLPQQ LQLQNHRFIG TPFSHLLKRH FSKEVRGSFL DKSEVTDRVI DCVKNFPKLD PSKVTPNAHF QNDLGLDSLD TVEIVMALEE
101: EFAFEIPDNE ADKISSIDLA VAFIASHPQA K

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.