Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004812_P002 | |
| Zm00001d023560_P002 | |
| Zm00001d053016_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G65290.1 | Zm00001d004812_P002 | AT1G35670.1 | 19130088 |
| AT1G65290.1 | Zm00001d023560_P002 | AT1G35670.1 | 19130088 |
| AT1G65290.1 | Zm00001d053016_P002 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 24.43 | 88.89 |
| EER92267 | Sorghum | mitochondrion | 81.68 | 81.68 |
| Os03t0352800-01 | Rice | mitochondrion | 83.21 | 80.74 |
| TraesCS4D01G159800.1 | Wheat | mitochondrion | 79.39 | 78.2 |
| TraesCS4B01G161900.1 | Wheat | mitochondrion | 79.39 | 78.2 |
| TraesCS4A01G146900.1 | Wheat | mitochondrion | 79.39 | 77.61 |
| Bra022484.1-P | Field mustard | mitochondrion | 64.89 | 64.89 |
| CDY16401 | Canola | mitochondrion | 64.89 | 64.89 |
| CDY39292 | Canola | mitochondrion | 59.54 | 64.46 |
| CDX91509 | Canola | mitochondrion | 63.36 | 63.36 |
| AT1G65290.1 | Thale cress | mitochondrion | 60.31 | 62.7 |
| VIT_04s0023g00840.t01 | Wine grape | mitochondrion | 60.31 | 62.2 |
| PGSC0003DMT400070136 | Potato | mitochondrion | 60.31 | 61.72 |
| Solyc04g015370.2.1 | Tomato | mitochondrion | 59.54 | 60.94 |
| CDY37654 | Canola | mitochondrion | 60.31 | 60.31 |
| Zm00001d038057_P002 | Maize | mitochondrion | 58.02 | 59.84 |
| CDY65005 | Canola | mitochondrion | 59.54 | 59.54 |
| PGSC0003DMT400060304 | Potato | mitochondrion | 58.78 | 58.78 |
| Solyc05g056240.2.1 | Tomato | mitochondrion | 58.78 | 58.78 |
| Bra035355.1-P | Field mustard | mitochondrion | 58.78 | 58.78 |
| PGSC0003DMT400064261 | Potato | mitochondrion | 58.02 | 58.02 |
| HORVU4Hr1G046230.1 | Barley | cytosol, mitochondrion, plastid | 76.34 | 52.36 |
| Zm00001d019186_P001 | Maize | mitochondrion | 51.15 | 50.38 |
| KRH37350 | Soybean | extracellular, golgi | 28.24 | 47.44 |
| CDY07443 | Canola | mitochondrion | 59.54 | 42.62 |
| Bra004110.1-P | Field mustard | mitochondrion | 59.54 | 42.62 |
| Zm00001d033149_P001 | Maize | mitochondrion | 41.98 | 40.44 |
Protein Annotations
| Gene3D:1.10.1200.10 | EntrezGene:100282353 | MapMan:5.1.5.1 | InterPro:ACP-like_sf | ProteinID:AQL09019.1 | InterPro:Acyl_carrier |
| UniProt:B4FK69 | EMBL:BT037507 | EMBL:EU959784 | EMBL:EU960579 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0031177 | InterPro:IPR009081 | InterPro:IPR036736 | HAMAP:MF_01217 | PFAM:PD000887 | PFAM:PF00550 |
| InterPro:PKS_PP-bd | InterPro:PP-bd_ACP | ScanProsite:PS00012 | PFscan:PS50075 | PANTHER:PTHR20863 | PANTHER:PTHR20863:SF37 |
| InterPro:Ppantetheine_attach_site | SMART:SM00823 | SUPFAM:SSF47336 | TIGRFAMs:TIGR00517 | UniParc:UPI00017B701C | EnsemblPlantsGene:Zm00001d048163 |
| EnsemblPlants:Zm00001d048163_P001 | EnsemblPlants:Zm00001d048163_T001 | SEG:seg | : | : | : |
Description
Acyl carrier protein
Coordinates
chr9:-:151221532..151226884
Molecular Weight (calculated)
14441.2 Da
IEP (calculated)
5.244
GRAVY (calculated)
-0.208
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARSLLLR HLRLAAAPSA ASVRPTASLH EALWGQRWMS SEDAKGSFLD KSEVTERIIK VVKSFPKIDD PSKVTPDAHF KNDLGLDSLD AVEVVMALEE
101: EFRFEIPDNE ADKIDSVKVA VDFIASHPQA K
101: EFRFEIPDNE ADKIDSVKVA VDFIASHPQA K
001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
Arabidopsis Description
MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.