CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73342
CDY37101

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	CDX73342	AT1G35670.1	19130088
AT1G65290.1	CDY37101	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G65290.1	Thale cress	mitochondrion	84.3	80.95
GSMUA_Achr10P...	Banana	cytosol	23.97	80.56
CDX91509	Canola	mitochondrion	86.78	80.15
CDY16401	Canola	mitochondrion	85.95	79.39
CDY37654	Canola	mitochondrion	80.17	74.05
CDY65005	Canola	mitochondrion	80.17	74.05
KRH40273	Soybean	nucleus	75.21	71.09
Solyc04g015370.2.1	Tomato	mitochondrion	75.21	71.09
PGSC0003DMT400070136	Potato	mitochondrion	74.38	70.31
VIT_04s0023g00840.t01	Wine grape	mitochondrion	73.55	70.08
KRH00953	Soybean	mitochondrion	73.55	69.53
PGSC0003DMT400060304	Potato	mitochondrion	72.73	67.18
PGSC0003DMT400064261	Potato	mitochondrion	72.73	67.18
GSMUA_Achr9P17820_001	Banana	mitochondrion	69.42	66.67
Solyc05g056240.2.1	Tomato	mitochondrion	71.9	66.41
GSMUA_Achr8P22050_001	Banana	mitochondrion	67.77	65.08
GSMUA_Achr1P11200_001	Banana	mitochondrion	66.12	64.0
CDY07443	Canola	mitochondrion	96.69	63.93
EES19437	Sorghum	mitochondrion	66.12	62.5
Zm00001d038057_P002	Maize	mitochondrion	65.29	62.2
TraesCS1B01G249700.1	Wheat	mitochondrion	63.64	60.16
Os05t0377000-01	Rice	mitochondrion	63.64	59.69
EER92267	Sorghum	mitochondrion	64.46	59.54
Zm00001d048163_P001	Maize	mitochondrion	64.46	59.54
TraesCS1D01G238200.1	Wheat	mitochondrion	62.81	58.46
Os03t0352800-01	Rice	mitochondrion	64.46	57.78
TraesCS4D01G159800.1	Wheat	mitochondrion	61.98	56.39
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	25.62	56.36
TraesCS4A01G146900.1	Wheat	mitochondrion	61.98	55.97
TraesCS4B01G161900.1	Wheat	mitochondrion	61.16	55.64
CDY48242	Canola	mitochondrion	53.72	52.0
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	28.1	51.52
HORVU3Hr1G095440.1	Barley	vacuole	28.1	51.52
CDX74673	Canola	mitochondrion	52.89	51.2
CDX95607	Canola	mitochondrion	50.41	50.83
CDX83424	Canola	mitochondrion	50.41	50.83
HORVU2Hr1G014270.1	Barley	vacuole	27.27	50.0
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.27	50.0
HORVU0Hr1G002040.1	Barley	vacuole	27.27	50.0
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.27	50.0
HORVU2Hr1G014260.1	Barley	extracellular	26.45	48.48
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	24.79	45.45
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	61.98	43.6
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	25.62	40.26
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	59.5	37.7
CDY28917	Canola	mitochondrion	38.02	36.22
CDY40553	Canola	cytosol	38.84	24.23

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	GO:A0A078HN44	UniProt:A0A078HN44	InterPro:ACP-like_sf	InterPro:Acyl_carrier
EnsemblPlants:CDY39292	ProteinID:CDY39292	ProteinID:CDY39292.1	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00067538001	InterPro:IPR009081	InterPro:IPR036736
HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	PFscan:PS50075	PANTHER:PTHR20863
PANTHER:PTHR20863:SF37	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniPathway:UPA00094	UniParc:UPI0004EE27D5	SEG:seg

Description

BnaC06g26990DAcyl carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN44]

Coordinates

chrLK032444:+:282010..282820

Molecular Weight (calculated)

13427.9 Da

IEP (calculated)

4.564

GRAVY (calculated)

-0.135

Length

121 amino acids

Sequence
(BLAST)

001: MAARNALLRY LRVNVNPSPA LPSSSVLLRR FSEEVRGSFL DKSDVTDRVI SVVKNFQRVD PSKVTPKAHF INDLGLDSLD NVEVVMALEE EFGFEIPDND
101: ADKIQSVDLA VDFIASHPQA T

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.