Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004812_P002 | |
| Zm00001d023560_P002 | |
| Zm00001d053016_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G65290.1 | Zm00001d004812_P002 | AT1G35670.1 | 19130088 |
| AT1G65290.1 | Zm00001d023560_P002 | AT1G35670.1 | 19130088 |
| AT1G65290.1 | Zm00001d053016_P002 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19437 | Sorghum | mitochondrion | 85.04 | 84.38 |
| Os05t0377000-01 | Rice | mitochondrion | 85.04 | 83.72 |
| TraesCS1B01G249700.1 | Wheat | mitochondrion | 83.46 | 82.81 |
| TraesCS1D01G238200.1 | Wheat | mitochondrion | 81.89 | 80.0 |
| GSMUA_Achr1P11200_001 | Banana | mitochondrion | 69.29 | 70.4 |
| CDY39292 | Canola | mitochondrion | 62.2 | 65.29 |
| AT1G65290.1 | Thale cress | mitochondrion | 63.78 | 64.29 |
| CDY37654 | Canola | mitochondrion | 63.78 | 61.83 |
| CDY65005 | Canola | mitochondrion | 63.78 | 61.83 |
| Bra035355.1-P | Field mustard | mitochondrion | 62.99 | 61.07 |
| Solyc04g015370.2.1 | Tomato | mitochondrion | 61.42 | 60.94 |
| PGSC0003DMT400070136 | Potato | mitochondrion | 61.42 | 60.94 |
| PGSC0003DMT400060304 | Potato | mitochondrion | 62.2 | 60.31 |
| VIT_04s0023g00840.t01 | Wine grape | mitochondrion | 59.84 | 59.84 |
| CDY16401 | Canola | mitochondrion | 61.42 | 59.54 |
| Bra022484.1-P | Field mustard | mitochondrion | 61.42 | 59.54 |
| Solyc05g056240.2.1 | Tomato | mitochondrion | 61.42 | 59.54 |
| PGSC0003DMT400064261 | Potato | mitochondrion | 61.42 | 59.54 |
| CDX91509 | Canola | mitochondrion | 61.42 | 59.54 |
| HORVU1Hr1G057570.4 | Barley | mitochondrion, plastid | 80.31 | 59.3 |
| Zm00001d048163_P001 | Maize | mitochondrion | 59.84 | 58.02 |
| KRH37350 | Soybean | extracellular, golgi | 31.5 | 51.28 |
| Zm00001d019186_P001 | Maize | mitochondrion | 47.24 | 45.11 |
| CDY07443 | Canola | mitochondrion | 62.2 | 43.17 |
| Bra004110.1-P | Field mustard | mitochondrion | 62.2 | 43.17 |
| Zm00001d033149_P001 | Maize | mitochondrion | 41.73 | 38.97 |
Protein Annotations
| Gene3D:1.10.1200.10 | MapMan:5.1.5.1 | InterPro:ACP-like_sf | ProteinID:AQK85534.1 | ProteinID:AQK85535.1 | InterPro:Acyl_carrier |
| UniProt:B6SND3 | EMBL:BT065110 | EMBL:BT087142 | EMBL:EU954248 | EMBL:EU962438 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009081 |
| InterPro:IPR036736 | HAMAP:MF_01217 | PFAM:PD000887 | PFAM:PF00550 | InterPro:PP-bd_ACP | ScanProsite:PS00012 |
| PFscan:PS50075 | PANTHER:PTHR20863 | PANTHER:PTHR20863:SF37 | InterPro:Ppantetheine_attach_site | SUPFAM:SSF47336 | TIGRFAMs:TIGR00517 |
| UniParc:UPI000182B405 | EnsemblPlantsGene:Zm00001d038057 | EnsemblPlants:Zm00001d038057_P002 | EnsemblPlants:Zm00001d038057_T002 | SEG:seg | : |
Description
Acyl carrier protein
Coordinates
chr6:-:146563551..146567353
Molecular Weight (calculated)
13630.3 Da
IEP (calculated)
5.607
GRAVY (calculated)
0.004
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAARRAL LAHLRVPVVH PAAAAATIPA AGRLLSSTTE TKGSFLDKGE VADRVVSVVK NFQKVEPSKV TPSAHFQKDL GLDSLDTVEI VMAFEEEFSF
101: EIPDNDAEKI DSIKTAVDFI ASHPQAK
101: EIPDNDAEKI DSIKTAVDFI ASHPQAK
001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
Arabidopsis Description
MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.