CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65005	Canola	mitochondrion	96.95	96.95
Bra035355.1-P	Field mustard	mitochondrion	94.66	94.66
GSMUA_Achr10P...	Banana	cytosol	22.9	83.33
CDY39292	Canola	mitochondrion	74.05	80.17
CDY16401	Canola	mitochondrion	74.81	74.81
CDX91509	Canola	mitochondrion	73.28	73.28
GSMUA_Achr8P22050_001	Banana	mitochondrion	67.18	69.84
Solyc04g015370.2.1	Tomato	mitochondrion	67.18	68.75
PGSC0003DMT400060304	Potato	mitochondrion	68.7	68.7
VIT_04s0023g00840.t01	Wine grape	mitochondrion	66.41	68.5
PGSC0003DMT400070136	Potato	mitochondrion	66.41	67.97
PGSC0003DMT400064261	Potato	mitochondrion	67.94	67.94
Solyc05g056240.2.1	Tomato	mitochondrion	67.94	67.94
KRH40273	Soybean	nucleus	65.65	67.19
GSMUA_Achr9P17820_001	Banana	mitochondrion	64.12	66.67
KRH00953	Soybean	mitochondrion	64.89	66.41
GSMUA_Achr1P11200_001	Banana	mitochondrion	63.36	66.4
TraesCS1B01G249700.1	Wheat	mitochondrion	62.6	64.06
Zm00001d038057_P002	Maize	mitochondrion	61.83	63.78
Os05t0377000-01	Rice	mitochondrion	62.6	63.57
EES19437	Sorghum	mitochondrion	61.83	63.28
TraesCS1D01G238200.1	Wheat	mitochondrion	62.6	63.08
Zm00001d048163_P001	Maize	mitochondrion	60.31	60.31
EER92267	Sorghum	mitochondrion	60.31	60.31
Os03t0352800-01	Rice	mitochondrion	61.83	60.0
TraesCS4D01G159800.1	Wheat	mitochondrion	57.25	56.39
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	23.66	56.36
TraesCS4A01G146900.1	Wheat	mitochondrion	57.25	55.97
TraesCS4B01G161900.1	Wheat	mitochondrion	56.49	55.64
CDX83424	Canola	mitochondrion	50.38	55.0
CDX95607	Canola	mitochondrion	50.38	55.0
CDY48242	Canola	mitochondrion	51.15	53.6
HORVU3Hr1G095440.1	Barley	vacuole	26.72	53.03
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	26.72	53.03
CDX74673	Canola	mitochondrion	50.38	52.8
CDY07443	Canola	mitochondrion	72.52	51.91
HORVU2Hr1G014260.1	Barley	extracellular	25.95	51.52
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.95	51.52
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.95	51.52
HORVU2Hr1G014270.1	Barley	vacuole	24.43	48.48
HORVU0Hr1G002040.1	Barley	vacuole	24.43	48.48
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	23.66	46.97
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	59.54	45.35
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	24.43	41.56
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	56.49	38.74
CDY28917	Canola	mitochondrion	35.11	36.22
CDY40553	Canola	cytosol	35.88	24.23

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	GO:A0A078HK38	UniProt:A0A078HK38	InterPro:ACP-like_sf	InterPro:Acyl_carrier
EnsemblPlants:CDY37654	ProteinID:CDY37654	ProteinID:CDY37654.1	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00064536001	InterPro:IPR009081	InterPro:IPR036736
HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075
PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniPathway:UPA00094
UniParc:UPI0004EDB4F0	:	:	:	:	:

Description

BnaC04g29960DAcyl carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK38]

Coordinates

chrLK032405:-:229116..230101

Molecular Weight (calculated)

14688.6 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.181

Length

131 amino acids

Sequence
(BLAST)

001: MASRNALLRY LRVNVTPALR SSSITSHRGV APLYVILRRR FSEEVRGSFL DKSEVTDRVV SVVKKFQKVE PSKVTAKAHF QNDLGLDSLD TVEVVMALEE
101: EFGFEIPDNE ADKIQSVDLA VEFIASHPQA K

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.