CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	EES09373	AT1G35670.1	19130088
AT1G65290.1	EES16732	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	24.43	88.89
Zm00001d048163_P001	Maize	mitochondrion	81.68	81.68
Os03t0352800-01	Rice	mitochondrion	76.34	74.07
TraesCS4A01G146900.1	Wheat	mitochondrion	71.76	70.15
TraesCS4B01G161900.1	Wheat	mitochondrion	70.99	69.92
TraesCS4D01G159800.1	Wheat	mitochondrion	70.99	69.92
CDY39292	Canola	mitochondrion	59.54	64.46
AT1G65290.1	Thale cress	mitochondrion	61.83	64.29
VIT_04s0023g00840.t01	Wine grape	mitochondrion	61.07	62.99
PGSC0003DMT400070136	Potato	mitochondrion	60.31	61.72
EES19437	Sorghum	mitochondrion	60.31	61.72
CDY16401	Canola	mitochondrion	61.07	61.07
Solyc04g015370.2.1	Tomato	mitochondrion	59.54	60.94
CDY65005	Canola	mitochondrion	60.31	60.31
CDY37654	Canola	mitochondrion	60.31	60.31
CDX91509	Canola	mitochondrion	60.31	60.31
Bra022484.1-P	Field mustard	mitochondrion	60.31	60.31
Solyc05g056240.2.1	Tomato	mitochondrion	59.54	59.54
Bra035355.1-P	Field mustard	mitochondrion	59.54	59.54
PGSC0003DMT400060304	Potato	mitochondrion	59.54	59.54
PGSC0003DMT400064261	Potato	mitochondrion	58.02	58.02
KRH37350	Soybean	extracellular, golgi	29.01	48.72
EER96074	Sorghum	mitochondrion	48.85	47.76
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	67.94	46.6
CDY07443	Canola	mitochondrion	59.54	42.62
Bra004110.1-P	Field mustard	mitochondrion	58.78	42.08
EER91268	Sorghum	mitochondrion	40.46	37.32

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	EntrezGene:8082287	InterPro:ACP-like_sf	InterPro:Acyl_carrier	UniProt:C5WZS2
EnsemblPlants:EER92267	ProteinID:EER92267	ProteinID:EER92267.1	GO:GO:0000035	GO:GO:0000036	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009245	GO:GO:0009987	GO:GO:0031177	InterPro:IPR009081	InterPro:IPR036736	HAMAP:MF_01217
PFAM:PD000887	PFAM:PF00550	InterPro:PKS_PP-bd	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075
PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	SMART:SM00823	EnsemblPlantsGene:SORBI_3001G370700	SUPFAM:SSF47336
SignalP:SignalP-noTM	TIGRFAMs:TIGR00517	UniParc:UPI0001A82256	RefSeq:XP_002465269.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:65914223..65918203

Molecular Weight (calculated)

14444.2 Da

IEP (calculated)

5.262

GRAVY (calculated)

-0.198

Length

131 amino acids

Sequence
(BLAST)

001: MAAARSLLLR HLRLAAAPSA ASVRPTASLQ EALWGRRWMS SEDAKGSFLD KSEVTERIVK VVKSFPKIDD PSKVTPDAHF KNDLGLDSLD AVEVVMALEE
101: EFRFEIPDNE ADKIDSIKVA VDFIAAHPQA K

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.