Factsheet for VIT_04s0023g00840.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0072g01030.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	VIT_18s0072g01030.t01	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	25.2	88.89
AT1G65290.1	Thale cress	mitochondrion	73.23	73.81
CDY39292	Canola	mitochondrion	70.08	73.55
KRH40273	Soybean	nucleus	73.23	72.66
Solyc04g015370.2.1	Tomato	mitochondrion	72.44	71.88
KRH00953	Soybean	mitochondrion	71.65	71.09
PGSC0003DMT400070136	Potato	mitochondrion	70.87	70.31
GSMUA_Achr8P22050_001	Banana	mitochondrion	67.72	68.25
CDY16401	Canola	mitochondrion	69.29	67.18
Bra022484.1-P	Field mustard	mitochondrion	69.29	67.18
Solyc05g056240.2.1	Tomato	mitochondrion	69.29	67.18
PGSC0003DMT400060304	Potato	mitochondrion	69.29	67.18
CDX91509	Canola	mitochondrion	69.29	67.18
PGSC0003DMT400064261	Potato	mitochondrion	68.5	66.41
CDY65005	Canola	mitochondrion	68.5	66.41
CDY37654	Canola	mitochondrion	68.5	66.41
GSMUA_Achr9P17820_001	Banana	mitochondrion	64.57	65.08
Bra035355.1-P	Field mustard	mitochondrion	66.93	64.89
GSMUA_Achr1P11200_001	Banana	mitochondrion	62.99	64.0
EES19437	Sorghum	mitochondrion	63.78	63.28
EER92267	Sorghum	mitochondrion	62.99	61.07
Zm00001d048163_P001	Maize	mitochondrion	62.2	60.31
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	25.98	60.0
Zm00001d038057_P002	Maize	mitochondrion	59.84	59.84
TraesCS4D01G159800.1	Wheat	mitochondrion	62.2	59.4
TraesCS1B01G249700.1	Wheat	mitochondrion	59.84	59.38
Os03t0352800-01	Rice	mitochondrion	62.99	59.26
TraesCS4A01G146900.1	Wheat	mitochondrion	62.2	58.96
Os05t0377000-01	Rice	mitochondrion	59.84	58.91
TraesCS4B01G161900.1	Wheat	mitochondrion	61.42	58.65
TraesCS1D01G238200.1	Wheat	mitochondrion	59.84	58.46
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	27.56	53.03
HORVU3Hr1G095440.1	Barley	vacuole	27.56	53.03
HORVU2Hr1G014260.1	Barley	extracellular	26.77	51.52
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.77	51.52
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.77	51.52
VIT_15s0021g00570.t01	Wine grape	mitochondrion	48.82	50.0
CDY07443	Canola	mitochondrion	70.08	48.63
Bra004110.1-P	Field mustard	mitochondrion	70.08	48.63
HORVU2Hr1G014270.1	Barley	vacuole	25.2	48.48
HORVU0Hr1G002040.1	Barley	vacuole	25.2	48.48
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	24.41	46.97
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	57.48	42.44
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	25.2	41.56
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	59.06	39.27
VIT_00s0259g00160.t01	Wine grape	mitochondrion	40.94	38.52
VIT_08s0007g03490.t01	Wine grape	mitochondrion	40.16	36.69

Protein Annotations

Gene3D:1.10.1200.10	EntrezGene:100854213	wikigene:100854213	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier
ProteinID:CBI17603	ProteinID:CBI17603.3	UniProt:D7SPM4	EMBL:FN594959	GO:GO:0000035	GO:GO:0000036
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009245	GO:GO:0009987	GO:GO:0031177	InterPro:IPR009081	InterPro:IPR036736
EntrezGene:LOC100854213	wikigene:LOC100854213	HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP
ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336
TIGR:TC69998	TIGRFAMs:TIGR00517	UniParc:UPI0001BE144D	ArrayExpress:VIT_04s0023g00840	EnsemblPlantsGene:VIT_04s0023g00840	EnsemblPlants:VIT_04s0023g00840.t01
unigene:Vvi.3224	RefSeq:XP_003631882	RefSeq:XP_003631882.1	:	:	:

Description

Acyl carrier protein [Source:UniProtKB/TrEMBL;Acc:D7SPM4]

Coordinates

chr4:-:17250379..17259009

Molecular Weight (calculated)

14375.1 Da

IEP (calculated)

4.941

GRAVY (calculated)

-0.272

Length

127 amino acids

Sequence
(BLAST)

001: MAARNALLKY LRVEARRLPQ NPNVPFQLSF NLIRRHFSEE IRGTFLDKSE VTDRVISVVK NFQKVDPSKV TPTANFQTDL GLDSLDAVEV VMALEEEFGF
101: EIPDNEADKI NTINVAVDFI SSHPQAK

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.