Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G019530.1 | |
| HORVU5Hr1G032550.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G65290.1 | HORVU4Hr1G019530.1 | AT1G35670.1 | 19130088 |
| AT1G65290.1 | HORVU5Hr1G032550.3 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G052220.1 | Barley | endoplasmic reticulum, extracellular | 69.7 | 83.64 |
| HORVU7Hr1G020950.3 | Barley | extracellular, vacuole | 92.42 | 79.22 |
| HORVU0Hr1G002030.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 62.12 | 62.12 |
| HORVU2Hr1G014260.1 | Barley | extracellular | 62.12 | 62.12 |
| HORVU0Hr1G002060.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 62.12 | 62.12 |
| HORVU3Hr1G052840.1 | Barley | endoplasmic reticulum, vacuole | 60.61 | 60.61 |
| HORVU3Hr1G095440.1 | Barley | vacuole | 60.61 | 60.61 |
| HORVU0Hr1G002040.1 | Barley | vacuole | 56.06 | 56.06 |
| HORVU2Hr1G014270.1 | Barley | vacuole | 56.06 | 56.06 |
| KRH37350 | Soybean | extracellular, golgi | 39.39 | 33.33 |
| AT1G65290.1 | Thale cress | mitochondrion | 51.52 | 26.98 |
| PGSC0003DMT400064261 | Potato | mitochondrion | 51.52 | 25.95 |
| PGSC0003DMT400060304 | Potato | mitochondrion | 51.52 | 25.95 |
| Solyc05g056240.2.1 | Tomato | mitochondrion | 51.52 | 25.95 |
| Solyc04g015370.2.1 | Tomato | mitochondrion | 50.0 | 25.78 |
| PGSC0003DMT400070136 | Potato | mitochondrion | 50.0 | 25.78 |
| CDY39292 | Canola | mitochondrion | 45.45 | 24.79 |
| CDY16401 | Canola | mitochondrion | 48.48 | 24.43 |
| CDX91509 | Canola | mitochondrion | 48.48 | 24.43 |
| Bra022484.1-P | Field mustard | mitochondrion | 48.48 | 24.43 |
| VIT_04s0023g00840.t01 | Wine grape | mitochondrion | 46.97 | 24.41 |
| CDY65005 | Canola | mitochondrion | 46.97 | 23.66 |
| CDY37654 | Canola | mitochondrion | 46.97 | 23.66 |
| Bra035355.1-P | Field mustard | mitochondrion | 46.97 | 23.66 |
| HORVU1Hr1G057570.4 | Barley | mitochondrion, plastid | 56.06 | 21.51 |
| HORVU7Hr1G037330.2 | Barley | mitochondrion | 34.85 | 17.42 |
| HORVU4Hr1G046230.1 | Barley | cytosol, mitochondrion, plastid | 50.0 | 17.28 |
| CDY07443 | Canola | mitochondrion | 45.45 | 16.39 |
| Bra004110.1-P | Field mustard | mitochondrion | 45.45 | 16.39 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G014230.2 | EnsemblPlantsGene:HORVU2Hr1G014230 | Gene3D:1.10.1200.10 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:ACP-like_sf | InterPro:Acyl_carrier | InterPro:IPR036736 |
| PANTHER:PTHR20863 | PANTHER:PTHR20863:SF37 | PFAM:PD000887 | SignalP:SignalP-noTM | SUPFAM:SSF47336 | TMHMM:TMhelix |
| UniParc:UPI000B4878AA | UniProt:A0A287H578 | MapMan:5.1.5.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:31196606..31197028
Molecular Weight (calculated)
7444.0 Da
IEP (calculated)
4.249
GRAVY (calculated)
0.456
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: AICWHFHCQA IFALVLCILN LNGMCSVEIV MAFEEEFSFE IPDNEAERID SIKSAVDFIA SHPQAK
001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
Arabidopsis Description
MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.