Factsheet for Bra004110.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034407.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	Bra034407.1-P	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07443	Canola	mitochondrion	98.36	98.36
GSMUA_Achr10P...	Banana	cytosol	15.85	80.56
AT1G65290.1	Thale cress	mitochondrion	54.64	79.37
Bra022484.1-P	Field mustard	mitochondrion	56.28	78.63
Bra035355.1-P	Field mustard	mitochondrion	51.91	72.52
KRH40273	Soybean	nucleus	49.18	70.31
VIT_04s0023g00840.t01	Wine grape	mitochondrion	48.63	70.08
Solyc04g015370.2.1	Tomato	mitochondrion	48.63	69.53
PGSC0003DMT400070136	Potato	mitochondrion	48.09	68.75
KRH00953	Soybean	mitochondrion	48.09	68.75
PGSC0003DMT400060304	Potato	mitochondrion	47.54	66.41
GSMUA_Achr9P17820_001	Banana	mitochondrion	45.36	65.87
Solyc05g056240.2.1	Tomato	mitochondrion	46.99	65.65
PGSC0003DMT400064261	Potato	mitochondrion	46.99	65.65
GSMUA_Achr8P22050_001	Banana	mitochondrion	44.26	64.29
GSMUA_Achr1P11200_001	Banana	mitochondrion	43.72	64.0
EES19437	Sorghum	mitochondrion	43.72	62.5
Zm00001d038057_P002	Maize	mitochondrion	43.17	62.2
TraesCS1B01G249700.1	Wheat	mitochondrion	42.08	60.16
Os05t0377000-01	Rice	mitochondrion	42.08	59.69
Zm00001d048163_P001	Maize	mitochondrion	42.62	59.54
EER92267	Sorghum	mitochondrion	42.08	58.78
TraesCS1D01G238200.1	Wheat	mitochondrion	41.53	58.46
Os03t0352800-01	Rice	mitochondrion	42.62	57.78
TraesCS4D01G159800.1	Wheat	mitochondrion	40.98	56.39
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	16.94	56.36
TraesCS4A01G146900.1	Wheat	mitochondrion	40.98	55.97
TraesCS4B01G161900.1	Wheat	mitochondrion	40.44	55.64
HORVU3Hr1G095440.1	Barley	vacuole	18.58	51.52
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	18.58	51.52
Bra004851.1-P	Field mustard	mitochondrion	34.97	51.2
HORVU2Hr1G014270.1	Barley	vacuole	18.03	50.0
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.03	50.0
HORVU0Hr1G002040.1	Barley	vacuole	18.03	50.0
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.03	50.0
Bra000356.1-P	Field mustard	mitochondrion	32.24	49.17
HORVU2Hr1G014260.1	Barley	extracellular	17.49	48.48
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	16.39	45.45
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	40.98	43.6
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	16.94	40.26
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	39.34	37.7
Bra022146.1-P	Field mustard	mitochondrion	25.14	36.22

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	EnsemblPlantsGene:Bra004110	EnsemblPlants:Bra004110.1
EnsemblPlants:Bra004110.1-P	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR009081	InterPro:IPR036736	UniProt:M4CIS6	HAMAP:MF_01217	PFAM:PD000887
PFAM:PF00550	InterPro:PP-bd_ACP	PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	SUPFAM:SSF47336
TIGRFAMs:TIGR00517	UniParc:UPI0002541404	:	:	:	:

Description

AT1G65290 (E=7e-050) mtACP2 | mtACP2 (mitochondrial acyl carrier protein 2); acyl carrier/ metal ion binding

Coordinates

chrA07:-:16898398..16899716

Molecular Weight (calculated)

20470.6 Da

IEP (calculated)

7.016

GRAVY (calculated)

-0.098

Length

183 amino acids

Sequence
(BLAST)

001: MAARNALLRY LRVNVNPSPA LPSSFALLRL FSEEVRGSFL DKSDVTDRVI SVVKNFQRVD PSKVTPKAHF INDLGLDSLD NVEVVMALEE EFGFEIPDND
101: ADKIQSVDLA VDFIASHPQA TVNPINKLFH SCIGSSFPED WKRNHSIHHR RIHKPEVLAM NGFLALPCSK KLCSGHHALL LSF

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.