Factsheet for GSMUA_Achr10P01240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	GSMUA_Achr10P...	AT1G35670.1	19130088
AT1G65290.1	GSMUA_Achr2P08110_001	AT1G35670.1	19130088
AT1G65290.1	GSMUA_Achr6P25560_001	AT1G35670.1	19130088
AT1G65290.1	GSMUA_Achr9P08680_001	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37350	Soybean	extracellular, golgi	63.89	29.49
GSMUA_Achr8P22050_001	Banana	mitochondrion	97.22	27.78
GSMUA_Achr9P17820_001	Banana	mitochondrion	94.44	26.98
Solyc04g015370.2.1	Tomato	mitochondrion	91.67	25.78
AT1G65290.1	Thale cress	mitochondrion	88.89	25.4
VIT_04s0023g00840.t01	Wine grape	mitochondrion	88.89	25.2
Os03t0352800-01	Rice	mitochondrion	94.44	25.19
PGSC0003DMT400070136	Potato	mitochondrion	88.89	25.0
GSMUA_Achr1P11200_001	Banana	mitochondrion	86.11	24.8
Zm00001d048163_P001	Maize	mitochondrion	88.89	24.43
EER92267	Sorghum	mitochondrion	88.89	24.43
CDY39292	Canola	mitochondrion	80.56	23.97
TraesCS4D01G159800.1	Wheat	mitochondrion	86.11	23.31
TraesCS4A01G146900.1	Wheat	mitochondrion	86.11	23.13
CDY65005	Canola	mitochondrion	83.33	22.9
Solyc05g056240.2.1	Tomato	mitochondrion	83.33	22.9
Bra035355.1-P	Field mustard	mitochondrion	83.33	22.9
PGSC0003DMT400064261	Potato	mitochondrion	83.33	22.9
PGSC0003DMT400060304	Potato	mitochondrion	83.33	22.9
CDY37654	Canola	mitochondrion	83.33	22.9
TraesCS4B01G161900.1	Wheat	mitochondrion	83.33	22.56
CDY16401	Canola	mitochondrion	80.56	22.14
CDX91509	Canola	mitochondrion	80.56	22.14
Bra022484.1-P	Field mustard	mitochondrion	80.56	22.14
GSMUA_Achr2P00030_001	Banana	mitochondrion	61.11	17.6
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	86.11	16.23
CDY07443	Canola	mitochondrion	80.56	15.85
Bra004110.1-P	Field mustard	mitochondrion	80.56	15.85
GSMUA_Achr2P13680_001	Banana	mitochondrion	38.89	10.85

Protein Annotations

EnsemblPlants:GSMUA_Achr10P01240_001	EnsemblPlants:GSMUA_Achr10T01240_001	EnsemblPlantsGene:GSMUA_Achr10G01240_001	Gene3D:1.10.1200.10	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:ACP-like_sf	InterPro:Acyl_carrier
InterPro:IPR009081	InterPro:IPR036736	InterPro:PP-bd_ACP	PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	PFAM:PD000887
PFscan:PS50075	SUPFAM:SSF47336	UniParc:UPI000296F335	UniProt:M0REF1	MapMan:5.1.5.1	:

Description

Acyl carrier protein, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G01240_001]

Coordinates

chr10:-:2445087..2445197

Molecular Weight (calculated)

3990.7 Da

IEP (calculated)

4.056

GRAVY (calculated)

-0.253

Length

36 amino acids

Sequence
(BLAST)

1: MALEEKFGFE IPDNEADKID SINVAVDFIA SHPQAK

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.