Factsheet for Os03t0352800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	Os11t0171500-01	AT1G35670.1	19130088
AT1G65290.1	Os12t0169800-00	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	25.19	94.44
Zm00001d048163_P001	Maize	mitochondrion	80.74	83.21
EER92267	Sorghum	mitochondrion	74.07	76.34
TraesCS4A01G146900.1	Wheat	mitochondrion	75.56	76.12
TraesCS4D01G159800.1	Wheat	mitochondrion	74.81	75.94
TraesCS4B01G161900.1	Wheat	mitochondrion	74.81	75.94
Os05t0377000-01	Rice	mitochondrion	62.96	65.89
AT1G65290.1	Thale cress	mitochondrion	60.74	65.08
CDY39292	Canola	mitochondrion	57.78	64.46
CDY16401	Canola	mitochondrion	61.48	63.36
Bra022484.1-P	Field mustard	mitochondrion	61.48	63.36
VIT_04s0023g00840.t01	Wine grape	mitochondrion	59.26	62.99
CDY37654	Canola	mitochondrion	60.0	61.83
CDX91509	Canola	mitochondrion	60.0	61.83
Solyc04g015370.2.1	Tomato	mitochondrion	58.52	61.72
CDY65005	Canola	mitochondrion	59.26	61.07
PGSC0003DMT400070136	Potato	mitochondrion	57.78	60.94
Bra035355.1-P	Field mustard	mitochondrion	58.52	60.31
PGSC0003DMT400060304	Potato	mitochondrion	56.3	58.02
Solyc05g056240.2.1	Tomato	mitochondrion	56.3	58.02
PGSC0003DMT400064261	Potato	mitochondrion	55.56	57.25
KRH37350	Soybean	extracellular, golgi	29.63	51.28
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	70.37	49.74
Os07t0222800-01	Rice	mitochondrion	42.22	43.51
CDY07443	Canola	mitochondrion	57.78	42.62
Bra004110.1-P	Field mustard	mitochondrion	57.78	42.62

Protein Annotations

Gene3D:1.10.1200.10	EntrezGene:4332854	MapMan:5.1.5.1	ProteinID:ABF95955.1	InterPro:ACP-like_sf	EMBL:AK059673
InterPro:Acyl_carrier	ProteinID:BAF12039.1	ProteinID:BAS84213.1	ProteinID:EAZ26928.1	GO:GO:0000035	GO:GO:0000036
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009245	GO:GO:0009987	GO:GO:0031177	InterPro:IPR009081	InterPro:IPR036736
HAMAP:MF_01217	EnsemblPlantsGene:Os03g0352800	EnsemblPlants:Os03t0352800-01	PFAM:PD000887	PFAM:PF00550	InterPro:PKS_PP-bd
InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site
UniProt:Q10LF1	SMART:SM00823	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniParc:UPI0000DB4637	RefSeq:XP_015632715.1
SEG:seg	:	:	:	:	:

Description

Similar to Acyl carrier protein 1 (EC 1.6.5.3) (EC 1.6.99.3). (Os03t0352800-01)

Coordinates

chr3:-:13258254..13260638

Molecular Weight (calculated)

14770.7 Da

IEP (calculated)

5.270

GRAVY (calculated)

-0.102

Length

135 amino acids

Sequence
(BLAST)

001: MAGARSLLLR HLRVAVAPSS SSPAASLRPV VALREALCAR RWMSSEEAKG SFLDKAEVTE RIVKVVRNFQ KIDDPAKVTP DAHFKNDLGL DSLDAVEVVM
101: ALEEEFGFEI PDNEADKIDS IKVAVDFIAS HPQAK

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.