CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73342
CDY37101

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	CDX73342	AT1G35670.1	19130088
AT1G65290.1	CDY37101	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022484.1-P	Field mustard	mitochondrion	98.47	98.47
CDX91509	Canola	mitochondrion	96.18	96.18
CDY39292	Canola	mitochondrion	79.39	85.95
AT1G65290.1	Thale cress	mitochondrion	78.63	81.75
GSMUA_Achr10P...	Banana	cytosol	22.14	80.56
CDY37654	Canola	mitochondrion	74.81	74.81
CDY65005	Canola	mitochondrion	74.81	74.81
KRH40273	Soybean	nucleus	67.94	69.53
PGSC0003DMT400060304	Potato	mitochondrion	69.47	69.47
VIT_04s0023g00840.t01	Wine grape	mitochondrion	67.18	69.29
Solyc04g015370.2.1	Tomato	mitochondrion	67.18	68.75
PGSC0003DMT400070136	Potato	mitochondrion	67.18	68.75
KRH00953	Soybean	mitochondrion	67.18	68.75
Solyc05g056240.2.1	Tomato	mitochondrion	68.7	68.7
PGSC0003DMT400064261	Potato	mitochondrion	68.7	68.7
GSMUA_Achr9P17820_001	Banana	mitochondrion	65.65	68.25
GSMUA_Achr8P22050_001	Banana	mitochondrion	64.89	67.46
GSMUA_Achr1P11200_001	Banana	mitochondrion	64.12	67.2
Zm00001d048163_P001	Maize	mitochondrion	64.89	64.89
EES19437	Sorghum	mitochondrion	61.07	62.5
TraesCS1B01G249700.1	Wheat	mitochondrion	60.31	61.72
Os03t0352800-01	Rice	mitochondrion	63.36	61.48
Zm00001d038057_P002	Maize	mitochondrion	59.54	61.42
EER92267	Sorghum	mitochondrion	61.07	61.07
Os05t0377000-01	Rice	mitochondrion	59.54	60.47
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	25.19	60.0
TraesCS1D01G238200.1	Wheat	mitochondrion	58.78	59.23
TraesCS4D01G159800.1	Wheat	mitochondrion	59.54	58.65
TraesCS4A01G146900.1	Wheat	mitochondrion	59.54	58.21
TraesCS4B01G161900.1	Wheat	mitochondrion	58.78	57.89
CDY48242	Canola	mitochondrion	52.67	55.2
CDY07443	Canola	mitochondrion	77.1	55.19
CDX83424	Canola	mitochondrion	50.38	55.0
CDX95607	Canola	mitochondrion	50.38	55.0
CDX74673	Canola	mitochondrion	51.91	54.4
HORVU3Hr1G095440.1	Barley	vacuole	26.72	53.03
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	26.72	53.03
HORVU2Hr1G014270.1	Barley	vacuole	25.95	51.52
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.95	51.52
HORVU0Hr1G002040.1	Barley	vacuole	25.95	51.52
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.95	51.52
HORVU2Hr1G014260.1	Barley	extracellular	25.19	50.0
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	24.43	48.48
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	57.25	43.6
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	24.43	41.56
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	57.25	39.27
CDY28917	Canola	mitochondrion	35.11	36.22
CDY40553	Canola	cytosol	35.11	23.71

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	GO:A0A078FTP4	UniProt:A0A078FTP4	InterPro:ACP-like_sf	InterPro:Acyl_carrier
EnsemblPlants:CDY16401	ProteinID:CDY16401	ProteinID:CDY16401.1	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00090939001	InterPro:IPR009081	InterPro:IPR036736
HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075
PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniPathway:UPA00094
UniParc:UPI0004EED631	:	:	:	:	:

Description

BnaA02g12050DAcyl carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTP4]

Coordinates

chrLK032063:-:366909..367837

Molecular Weight (calculated)

14551.3 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.069

Length

131 amino acids

Sequence
(BLAST)

001: MAARNALLRY LRVNVTPSLA SSTTIGARES ALPFTVLLRR FSEEVRGSFL DKSDVTDRVI TVVKNFQRVD PSKVTPKAHF LNDLGLDSLD SVEVVMALEE
101: EFKFEIPDNE ADKILSVDQA VDFIASHPQA T

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.