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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28917 Canola mitochondrion 52.58 80.31
AT5G47630.2 Thale cress mitochondrion 42.78 63.36
PGSC0003DMT400034738 Potato mitochondrion 35.05 51.13
Solyc11g012180.1.1 Tomato mitochondrion 34.02 49.62
Zm00001d033149_P001 Maize mitochondrion 34.02 48.53
KRH11585 Soybean plastid 34.02 47.83
EER91268 Sorghum mitochondrion 34.02 46.48
GSMUA_Achr2P13680_001 Banana mitochondrion 30.41 45.74
KRH36601 Soybean cytosol 35.57 45.1
VIT_00s0259g00160.t01 Wine grape mitochondrion 30.41 43.7
CDY39292 Canola mitochondrion 24.23 38.84
CDX83424 Canola mitochondrion 22.68 36.67
CDX95607 Canola mitochondrion 22.68 36.67
CDY48242 Canola mitochondrion 23.2 36.0
CDY37654 Canola mitochondrion 24.23 35.88
CDY65005 Canola mitochondrion 23.71 35.11
CDY16401 Canola mitochondrion 23.71 35.11
CDX91509 Canola mitochondrion 23.71 35.11
CDX74673 Canola mitochondrion 22.16 34.4
CDY07443 Canola mitochondrion 24.74 26.23
Protein Annotations
Gene3D:1.10.1200.10MapMan:5.1.5.1GO:A0A078HUV6UniProt:A0A078HUV6InterPro:ACP-like_sfInterPro:Acyl_carrier
EnsemblPlants:CDY40553ProteinID:CDY40553ProteinID:CDY40553.1GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00069876001InterPro:IPR009081InterPro:IPR036736
HAMAP:MF_01217PFAM:PD000887PFAM:PF14573InterPro:PP-bd_ACPPFscan:PS50075PANTHER:PTHR20863
PANTHER:PTHR20863:SF32SUPFAM:SSF47336TIGRFAMs:TIGR00517UniPathway:UPA00094UniParc:UPI0004EEC656SEG:seg
Description
BnaC02g33390DBnaC02g33390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUV6]
Coordinates
chrLK032474:-:57296..59839
Molecular Weight (calculated)
22081.7 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.262
Length
194 amino acids
Sequence
(BLAST)
001: MLTYRPDRVQ RKAGPRLIEE DDRLSLPLSY LPLQRKEYDL ENRKKLSFAV SQPLSSTRKM HCIRSSILQH LRLRVPVRSV LLLEKENVLI SKMNFTSGGG
101: QDQVLSKVIE LVKKYDTTSA SKVTETADFK KDLSLDSLDR VEIVMAIEEE FSVEIPDEKA DKLTCCADIA SFIVSETQSK APESCLYFLS SLFC
Best Arabidopsis Sequence Match ( AT5G47630.3 )
(BLAST)
001: MHCIRSSILQ HLRLRVSVRP TSLLQNENGF KSIGIFNFTS EAAADGGQDQ ILSRVIELVK KYDKTNTSEV TERADFQKDL SLDSLDKTEL VMAIEEEFSI
101: EIPDEKADKL TCCGDVATYI LSETPTKASE S
Arabidopsis Description
MTACP2Acyl carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A178UB54]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.