CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73342
CDY37101

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	CDX73342	AT1G35670.1	19130088
AT1G65290.1	CDY37101	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022484.1-P	Field mustard	mitochondrion	97.71	97.71
CDY16401	Canola	mitochondrion	96.18	96.18
CDY39292	Canola	mitochondrion	80.15	86.78
AT1G65290.1	Thale cress	mitochondrion	80.15	83.33
GSMUA_Achr10P...	Banana	cytosol	22.14	80.56
CDY37654	Canola	mitochondrion	73.28	73.28
CDY65005	Canola	mitochondrion	73.28	73.28
KRH40273	Soybean	nucleus	67.94	69.53
PGSC0003DMT400060304	Potato	mitochondrion	69.47	69.47
VIT_04s0023g00840.t01	Wine grape	mitochondrion	67.18	69.29
Solyc04g015370.2.1	Tomato	mitochondrion	67.18	68.75
PGSC0003DMT400070136	Potato	mitochondrion	67.18	68.75
KRH00953	Soybean	mitochondrion	67.18	68.75
Solyc05g056240.2.1	Tomato	mitochondrion	68.7	68.7
PGSC0003DMT400064261	Potato	mitochondrion	68.7	68.7
GSMUA_Achr9P17820_001	Banana	mitochondrion	65.65	68.25
GSMUA_Achr8P22050_001	Banana	mitochondrion	64.89	67.46
GSMUA_Achr1P11200_001	Banana	mitochondrion	64.12	67.2
Zm00001d048163_P001	Maize	mitochondrion	63.36	63.36
EES19437	Sorghum	mitochondrion	61.07	62.5
TraesCS1B01G249700.1	Wheat	mitochondrion	60.31	61.72
Zm00001d038057_P002	Maize	mitochondrion	59.54	61.42
Os05t0377000-01	Rice	mitochondrion	59.54	60.47
EER92267	Sorghum	mitochondrion	60.31	60.31
TraesCS1D01G238200.1	Wheat	mitochondrion	59.54	60.0
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	25.19	60.0
Os03t0352800-01	Rice	mitochondrion	61.83	60.0
TraesCS4D01G159800.1	Wheat	mitochondrion	60.31	59.4
TraesCS4A01G146900.1	Wheat	mitochondrion	60.31	58.96
TraesCS4B01G161900.1	Wheat	mitochondrion	59.54	58.65
CDY07443	Canola	mitochondrion	77.86	55.74
CDY48242	Canola	mitochondrion	52.67	55.2
CDX74673	Canola	mitochondrion	51.91	54.4
CDX95607	Canola	mitochondrion	48.85	53.33
CDX83424	Canola	mitochondrion	48.85	53.33
HORVU3Hr1G095440.1	Barley	vacuole	26.72	53.03
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	26.72	53.03
HORVU2Hr1G014270.1	Barley	vacuole	25.95	51.52
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.95	51.52
HORVU0Hr1G002040.1	Barley	vacuole	25.95	51.52
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.95	51.52
HORVU2Hr1G014260.1	Barley	extracellular	25.19	50.0
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	24.43	48.48
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	57.25	43.6
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	24.43	41.56
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	57.25	39.27
CDY28917	Canola	mitochondrion	35.11	36.22
CDY40553	Canola	cytosol	35.11	23.71

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	GO:A0A078DSN9	InterPro:ACP-like_sf	InterPro:Acyl_carrier	EnsemblPlants:CDX91509
ProteinID:CDX91509	ProteinID:CDX91509.1	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00152883001	InterPro:IPR009081	InterPro:IPR036736	HAMAP:MF_01217
PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863
PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniPathway:UPA00094	UniParc:UPI0004EDEFE5

Description

BnaC02g16510D

Coordinates

chrLK031868:+:41740..42783

Molecular Weight (calculated)

14675.5 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.077

Length

131 amino acids

Sequence
(BLAST)

001: MAARNALLRY LRVNVNPSLV NPTTICARES ALPFTVLLRR FSEEVRGSFL DKSDVTDRVI TVVKNFQRVD PSKVTPKAHF LNDLGLDSLD SVEVVMALEE
101: EFKFEIPDNE ADKILSVDQA VDFIASHPQA T

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.