Factsheet for HORVU3Hr1G095440.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	secretory
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	HORVU4Hr1G019530.1	AT1G35670.1	19130088
AT1G65290.1	HORVU5Hr1G032550.3	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G052840.1	Barley	endoplasmic reticulum, vacuole	95.45	95.45
HORVU0Hr1G002060.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	95.45	95.45
HORVU0Hr1G002030.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	95.45	95.45
HORVU2Hr1G014270.1	Barley	vacuole	93.94	93.94
HORVU0Hr1G002040.1	Barley	vacuole	93.94	93.94
HORVU5Hr1G052220.1	Barley	endoplasmic reticulum, extracellular	62.12	74.55
HORVU2Hr1G014260.1	Barley	extracellular	62.12	62.12
HORVU2Hr1G014230.2	Barley	endoplasmic reticulum, vacuole	60.61	60.61
HORVU7Hr1G020950.3	Barley	extracellular, vacuole	62.12	53.25
KRH37350	Soybean	extracellular, golgi	43.94	37.18
PGSC0003DMT400070136	Potato	mitochondrion	56.06	28.91
Solyc04g015370.2.1	Tomato	mitochondrion	56.06	28.91
AT1G65290.1	Thale cress	mitochondrion	54.55	28.57
PGSC0003DMT400060304	Potato	mitochondrion	56.06	28.24
PGSC0003DMT400064261	Potato	mitochondrion	56.06	28.24
Solyc05g056240.2.1	Tomato	mitochondrion	56.06	28.24
CDY39292	Canola	mitochondrion	51.52	28.1
VIT_04s0023g00840.t01	Wine grape	mitochondrion	53.03	27.56
CDY65005	Canola	mitochondrion	53.03	26.72
CDY37654	Canola	mitochondrion	53.03	26.72
CDY16401	Canola	mitochondrion	53.03	26.72
CDX91509	Canola	mitochondrion	53.03	26.72
Bra035355.1-P	Field mustard	mitochondrion	53.03	26.72
Bra022484.1-P	Field mustard	mitochondrion	53.03	26.72
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	65.15	25.0
HORVU4Hr1G046230.1	Barley	cytosol, mitochondrion, plastid	56.06	19.37
HORVU7Hr1G037330.2	Barley	mitochondrion	37.88	18.94
CDY07443	Canola	mitochondrion	51.52	18.58
Bra004110.1-P	Field mustard	mitochondrion	51.52	18.58

Protein Annotations

EnsemblPlants:HORVU3Hr1G095440.1	EnsemblPlantsGene:HORVU3Hr1G095440	Gene3D:1.10.1200.10	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:ACP-like_sf	InterPro:Acyl_carrier	InterPro:IPR036736
PANTHER:PTHR20863	PANTHER:PTHR20863:SF37	PFAM:PD000887	SUPFAM:SSF47336	UniParc:UPI000B46F2FF	UniProt:A0A287MDR0
MapMan:5.1.5.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:650117822..650118244

Molecular Weight (calculated)

7658.0 Da

IEP (calculated)

4.010

GRAVY (calculated)

0.020

Length

66 amino acids

Sequence
(BLAST)

1: QKLASIYVSN QFFFLEPNLF CIYTYNVEIV MAFEEEFSFE IPDNEAEKID SIKSAVDFIA SHPQAK

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.