Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G019530.1 | |
| HORVU5Hr1G032550.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G65290.1 | HORVU4Hr1G019530.1 | AT1G35670.1 | 19130088 |
| AT1G65290.1 | HORVU5Hr1G032550.3 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G249700.1 | Wheat | mitochondrion | 67.44 | 90.62 |
| TraesCS1D01G238200.1 | Wheat | mitochondrion | 66.28 | 87.69 |
| Os05t0377000-01 | Rice | mitochondrion | 61.63 | 82.17 |
| Zm00001d038057_P002 | Maize | mitochondrion | 59.3 | 80.31 |
| EES19437 | Sorghum | mitochondrion | 57.56 | 77.34 |
| HORVU5Hr1G052220.1 | Barley | endoplasmic reticulum, extracellular | 22.67 | 70.91 |
| GSMUA_Achr1P11200_001 | Banana | mitochondrion | 49.42 | 68.0 |
| HORVU3Hr1G052840.1 | Barley | endoplasmic reticulum, vacuole | 25.0 | 65.15 |
| HORVU3Hr1G095440.1 | Barley | vacuole | 25.0 | 65.15 |
| HORVU0Hr1G002060.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.42 | 63.64 |
| HORVU0Hr1G002030.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.42 | 63.64 |
| AT1G65290.1 | Thale cress | mitochondrion | 45.93 | 62.7 |
| HORVU2Hr1G014260.1 | Barley | extracellular | 23.84 | 62.12 |
| CDY39292 | Canola | mitochondrion | 43.6 | 61.98 |
| PGSC0003DMT400070136 | Potato | mitochondrion | 45.35 | 60.94 |
| Solyc04g015370.2.1 | Tomato | mitochondrion | 45.35 | 60.94 |
| HORVU2Hr1G014270.1 | Barley | vacuole | 23.26 | 60.61 |
| HORVU0Hr1G002040.1 | Barley | vacuole | 23.26 | 60.61 |
| PGSC0003DMT400060304 | Potato | mitochondrion | 45.93 | 60.31 |
| CDY65005 | Canola | mitochondrion | 45.35 | 59.54 |
| CDY37654 | Canola | mitochondrion | 45.35 | 59.54 |
| Solyc05g056240.2.1 | Tomato | mitochondrion | 45.35 | 59.54 |
| Bra035355.1-P | Field mustard | mitochondrion | 45.35 | 59.54 |
| PGSC0003DMT400064261 | Potato | mitochondrion | 44.77 | 58.78 |
| VIT_04s0023g00840.t01 | Wine grape | mitochondrion | 42.44 | 57.48 |
| CDY16401 | Canola | mitochondrion | 43.6 | 57.25 |
| CDX91509 | Canola | mitochondrion | 43.6 | 57.25 |
| Bra022484.1-P | Field mustard | mitochondrion | 43.6 | 57.25 |
| HORVU2Hr1G014230.2 | Barley | endoplasmic reticulum, vacuole | 21.51 | 56.06 |
| HORVU7Hr1G020950.3 | Barley | extracellular, vacuole | 22.67 | 50.65 |
| HORVU7Hr1G037330.2 | Barley | mitochondrion | 37.79 | 49.24 |
| HORVU4Hr1G046230.1 | Barley | cytosol, mitochondrion, plastid | 47.67 | 42.93 |
| CDY07443 | Canola | mitochondrion | 43.6 | 40.98 |
| Bra004110.1-P | Field mustard | mitochondrion | 43.6 | 40.98 |
Protein Annotations
| Gene3D:1.10.1200.10 | MapMan:5.1.5.1 | UniProt:A0A287FRJ4 | InterPro:ACP-like_sf | InterPro:Acyl_carrier | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU1Hr1G057570 |
| EnsemblPlants:HORVU1Hr1G057570.4 | InterPro:IPR009081 | InterPro:IPR036736 | HAMAP:MF_01217 | PFAM:PD000887 | PFAM:PF00550 |
| InterPro:PP-bd_ACP | ScanProsite:PS00012 | PFscan:PS50075 | PANTHER:PTHR20863 | PANTHER:PTHR20863:SF37 | InterPro:Ppantetheine_attach_site |
| SUPFAM:SSF47336 | TIGRFAMs:TIGR00517 | UniParc:UPI000B47A7AB | SEG:seg | : | : |
Description
Acyl carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A287FRJ4]
Coordinates
chrchr1H:-:420230049..420233386
Molecular Weight (calculated)
18592.2 Da
IEP (calculated)
8.276
GRAVY (calculated)
-0.187
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: NGPGFVRSID HRLALARTTA AAGRPRCPSP PHSLHVCTNR DERGMAMAAA ARRALLNHLR VPVARPAVAA ASVPVARLLS STTEAEKGSF LDKAEVADRV
101: VSVIKNFQKI EPSKVTPNAH FQKDLGLDSL DTVEIVMAFE EEFSFEIPDT EAEKIDSIKS AVDFIASHPK AK
101: VSVIKNFQKI EPSKVTPNAH FQKDLGLDSL DTVEIVMAFE EEFSFEIPDT EAEKIDSIKS AVDFIASHPK AK
001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
101: IPDNEADKIQ SIDLAVDFIA SHPQAK
Arabidopsis Description
MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.