Factsheet for GSMUA_Achr1P11200_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	GSMUA_Achr10P...	AT1G35670.1	19130088
AT1G65290.1	GSMUA_Achr2P08110_001	AT1G35670.1	19130088
AT1G65290.1	GSMUA_Achr6P25560_001	AT1G35670.1	19130088
AT1G65290.1	GSMUA_Achr9P08680_001	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	24.8	86.11
GSMUA_Achr8P22050_001	Banana	mitochondrion	79.2	78.57
GSMUA_Achr9P17820_001	Banana	mitochondrion	77.6	76.98
Os05t0377000-01	Rice	mitochondrion	72.8	70.54
TraesCS1B01G249700.1	Wheat	mitochondrion	71.2	69.53
Zm00001d038057_P002	Maize	mitochondrion	70.4	69.29
EES19437	Sorghum	mitochondrion	70.4	68.75
AT1G65290.1	Thale cress	mitochondrion	68.8	68.25
TraesCS1D01G238200.1	Wheat	mitochondrion	69.6	66.92
CDY39292	Canola	mitochondrion	64.0	66.12
Bra035355.1-P	Field mustard	mitochondrion	68.0	64.89
CDY16401	Canola	mitochondrion	67.2	64.12
CDY65005	Canola	mitochondrion	67.2	64.12
CDX91509	Canola	mitochondrion	67.2	64.12
Bra022484.1-P	Field mustard	mitochondrion	67.2	64.12
Solyc04g015370.2.1	Tomato	mitochondrion	65.6	64.06
CDY37654	Canola	mitochondrion	66.4	63.36
PGSC0003DMT400070136	Potato	mitochondrion	64.8	63.28
VIT_04s0023g00840.t01	Wine grape	mitochondrion	64.0	62.99
PGSC0003DMT400060304	Potato	mitochondrion	65.6	62.6
PGSC0003DMT400064261	Potato	mitochondrion	64.8	61.83
Solyc05g056240.2.1	Tomato	mitochondrion	64.8	61.83
KRH37350	Soybean	extracellular, golgi	32.0	51.28
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	68.0	49.42
GSMUA_Achr2P00030_001	Banana	mitochondrion	46.4	46.4
Bra004110.1-P	Field mustard	mitochondrion	64.0	43.72
CDY07443	Canola	mitochondrion	64.0	43.72
GSMUA_Achr2P13680_001	Banana	mitochondrion	37.6	36.43

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G11200_001	EnsemblPlants:GSMUA_Achr1P11200_001
EnsemblPlants:GSMUA_Achr1T11200_001	InterPro:IPR009081	InterPro:IPR036736	UniProt:M0RYX9	HAMAP:MF_01217	PFAM:PD000887
PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF37
InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniParc:UPI0002967B7D	:	:

Description

Acyl carrier protein, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G11200_001]

Coordinates

chr1:+:8544671..8547118

Molecular Weight (calculated)

13740.4 Da

IEP (calculated)

5.198

GRAVY (calculated)

0.018

Length

125 amino acids

Sequence
(BLAST)

001: MAAVRSAILR HLRLRVVSSA PQVSSPFASL LRCGFSDEVK GSFLDKSEVA DRIITVVKNF QKVDPSKVTS NAHFQKDLGL DSLDTVEVVM AFEEEFGFEI
101: PDSEADKIDC IKVAVDFIAS HPQAK

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.