CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65290.1	EES09373	AT1G35670.1	19130088
AT1G65290.1	EES16732	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038057_P002	Maize	mitochondrion	84.38	85.04
TraesCS1B01G249700.1	Wheat	mitochondrion	82.81	82.81
Os05t0377000-01	Rice	mitochondrion	82.03	81.4
TraesCS1D01G238200.1	Wheat	mitochondrion	81.25	80.0
GSMUA_Achr1P11200_001	Banana	mitochondrion	68.75	70.4
AT1G65290.1	Thale cress	mitochondrion	65.62	66.67
CDY39292	Canola	mitochondrion	62.5	66.12
Solyc04g015370.2.1	Tomato	mitochondrion	64.84	64.84
PGSC0003DMT400070136	Potato	mitochondrion	64.84	64.84
VIT_04s0023g00840.t01	Wine grape	mitochondrion	63.28	63.78
CDY37654	Canola	mitochondrion	63.28	61.83
CDY65005	Canola	mitochondrion	63.28	61.83
Bra035355.1-P	Field mustard	mitochondrion	63.28	61.83
CDY16401	Canola	mitochondrion	62.5	61.07
CDX91509	Canola	mitochondrion	62.5	61.07
Bra022484.1-P	Field mustard	mitochondrion	62.5	61.07
PGSC0003DMT400060304	Potato	mitochondrion	61.72	60.31
EER92267	Sorghum	mitochondrion	61.72	60.31
PGSC0003DMT400064261	Potato	mitochondrion	60.94	59.54
Solyc05g056240.2.1	Tomato	mitochondrion	60.94	59.54
HORVU1Hr1G057570.4	Barley	mitochondrion, plastid	77.34	57.56
KRH37350	Soybean	extracellular, golgi	31.25	51.28
EER96074	Sorghum	mitochondrion	53.12	50.75
CDY07443	Canola	mitochondrion	62.5	43.72
Bra004110.1-P	Field mustard	mitochondrion	62.5	43.72
EER91268	Sorghum	mitochondrion	41.41	37.32

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	EntrezGene:8077935	InterPro:ACP-like_sf	InterPro:Acyl_carrier	UniProt:C5YXB7
EnsemblPlants:EES19437	ProteinID:EES19437	ProteinID:EES19437.1	GO:GO:0000035	GO:GO:0000036	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009245	GO:GO:0009987	GO:GO:0031177	InterPro:IPR009081	InterPro:IPR036736	HAMAP:MF_01217
PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863
PANTHER:PTHR20863:SF37	InterPro:Ppantetheine_attach_site	EnsemblPlantsGene:SORBI_3009G119900	SUPFAM:SSF47336	unigene:Sbi.7013	TIGRFAMs:TIGR00517
UniParc:UPI0001A88A2D	RefSeq:XP_002441007.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:47006894..47010121

Molecular Weight (calculated)

13830.5 Da

IEP (calculated)

5.627

GRAVY (calculated)

-0.113

Length

128 amino acids

Sequence
(BLAST)

001: MAMAAARRAL LAHLRVPAVH PAAAGGTIPA ARRLLSSTTE ETKGSFLDKG EVADRVLSVV KNFQKVEPSK VTPTAHFQKD LGLDSLDTVE VVMAFEEEFS
101: FEIPDNEAEK IDSIKTAVDF IASHPQAK

Best Arabidopsis Sequence Match ( AT1G65290.1 )
(BLAST)

001: MAARGAMLRY LRVNVNPTIQ NPRECVLPFS ILLRRFSEEV RGSFLDKSEV TDRVLSVVKN FQKVDPSKVT PKANFQNDLG LDSLDSVEVV MALEEEFGFE
101: IPDNEADKIQ SIDLAVDFIA SHPQAK

Arabidopsis Description

MTACP2Acyl carrier protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.