CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU89456

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44620.1	OQU89456	AT4G04320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0222800-01	Rice	mitochondrion	88.81	90.84
TraesCS7A01G181900.2	Wheat	mitochondrion	84.33	87.6
Zm00001d019186_P001	Maize	mitochondrion	86.57	87.22
HORVU7Hr1G037330.2	Barley	mitochondrion	85.82	87.12
TraesCS7D01G183300.1	Wheat	mitochondrion	85.07	86.36
TraesCS7B01G086700.1	Wheat	mitochondrion	85.07	86.36
AT2G44620.1	Thale cress	mitochondrion	61.19	67.21
CDX95607	Canola	mitochondrion	59.7	66.67
CDX83424	Canola	mitochondrion	59.7	66.67
Solyc01g088570.2.1	Tomato	mitochondrion	59.7	65.57
KRH40249	Soybean	mitochondrion	56.72	65.52
KRH00978	Soybean	mitochondrion	56.72	65.52
Bra000356.1-P	Field mustard	mitochondrion	58.21	65.0
PGSC0003DMT400004235	Potato	mitochondrion	58.96	64.75
CDX74673	Canola	mitochondrion	59.7	64.0
Bra004851.1-P	Field mustard	mitochondrion	59.7	64.0
VIT_15s0021g00570.t01	Wine grape	mitochondrion	58.96	63.71
CDY48242	Canola	mitochondrion	58.21	62.4
GSMUA_Achr2P00030_001	Banana	mitochondrion	57.46	61.6
EES19437	Sorghum	mitochondrion	50.75	53.12
EER92267	Sorghum	mitochondrion	47.76	48.85
EER91268	Sorghum	mitochondrion	33.58	31.69

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	EntrezGene:8069105	InterPro:ACP-like_sf	InterPro:Acyl_carrier	UniProt:C5XDC9
EnsemblPlants:EER96074	ProteinID:EER96074	ProteinID:EER96074.1	GO:GO:0000035	GO:GO:0000036	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0005829	GO:GO:0005975	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009245	GO:GO:0009987	GO:GO:0031177	InterPro:IPR009081
InterPro:IPR036736	HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012
PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF41	InterPro:Ppantetheine_attach_site	EnsemblPlantsGene:SORBI_3002G078300	SUPFAM:SSF47336
unigene:Sbi.10221	TIGRFAMs:TIGR00517	UniParc:UPI0001A83950	RefSeq:XP_002459553.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:8140737..8141673

Molecular Weight (calculated)

14527.5 Da

IEP (calculated)

5.515

GRAVY (calculated)

-0.062

Length

134 amino acids

Sequence
(BLAST)

001: MAAAALRPAI LRRIRLSPTP SLALAAAGAG ASSHPHALAR WLARPMSSHD AHLTREEVVD RVLDVLKSHP KVDPSKVTPE AHFEKDLGLD SLDTVEVVMA
101: IEEEFKLEIP DMEADKIDSL PLAIEYVANH PMAG

Best Arabidopsis Sequence Match ( AT2G44620.1 )
(BLAST)

001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS

Arabidopsis Description

MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.