Factsheet for Solyc01g088570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g036290.2.1
Solyc02g036300.2.1
Solyc02g036310.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44620.1	Solyc02g036290.2.1	AT4G04320.1	21798944
AT2G44620.1	Solyc02g036300.2.1	AT4G04320.1	21798944
AT2G44620.1	Solyc02g036310.2.1	AT4G04320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004235	Potato	mitochondrion	97.54	97.54
CDX83424	Canola	mitochondrion	69.67	70.83
CDX95607	Canola	mitochondrion	69.67	70.83
Bra000356.1-P	Field mustard	mitochondrion	68.85	70.0
AT2G44620.1	Thale cress	mitochondrion	69.67	69.67
Bra004851.1-P	Field mustard	mitochondrion	68.03	66.4
CDX74673	Canola	mitochondrion	68.03	66.4
VIT_15s0021g00570.t01	Wine grape	mitochondrion	67.21	66.13
KRH40249	Soybean	mitochondrion	62.3	65.52
KRH00978	Soybean	mitochondrion	62.3	65.52
CDY48242	Canola	mitochondrion	66.39	64.8
TraesCS7A01G181900.2	Wheat	mitochondrion	68.03	64.34
GSMUA_Achr2P00030_001	Banana	mitochondrion	65.57	64.0
HORVU7Hr1G037330.2	Barley	mitochondrion	68.03	62.88
TraesCS7B01G086700.1	Wheat	mitochondrion	68.03	62.88
TraesCS7D01G183300.1	Wheat	mitochondrion	68.03	62.88
Os07t0222800-01	Rice	mitochondrion	65.57	61.07
Zm00001d019186_P001	Maize	mitochondrion	65.57	60.15
EER96074	Sorghum	mitochondrion	65.57	59.7
Solyc04g015370.2.1	Tomato	mitochondrion	45.9	43.75
Solyc05g056240.2.1	Tomato	mitochondrion	45.08	41.98
Solyc11g012180.1.1	Tomato	mitochondrion	36.89	33.83

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	GO:GO:0000035	GO:GO:0000036
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	GO:GO:0005829	GO:GO:0005975	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009245	GO:GO:0009987	GO:GO:0031177
InterPro:IPR009081	InterPro:IPR036736	UniProt:K4AYP7	HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550
InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF41	InterPro:Ppantetheine_attach_site
SUPFAM:SSF47336	EnsemblPlantsGene:Solyc01g088570.2	EnsemblPlants:Solyc01g088570.2.1	TIGRFAMs:TIGR00517	UniParc:UPI0002761963	:

Description

Acyl carrier protein 1, mitochondrial [Source:Projected from Arabidopsis thaliana (AT2G44620) UniProtKB/Swiss-Prot;Acc:P53665]

Coordinates

chr1:+:83347328..83350968

Molecular Weight (calculated)

13727.6 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.121

Length

122 amino acids

Sequence
(BLAST)

001: MASALRSAIL RHIRIPATQA VSANGLRLTA VRLMSSHDDH ITKDEVIKRV LDVVKCFPKV DPSKVTPEVH FEKDLGLDSL DTVEIVMALE EEFKLEIPDK
101: EAVRIESCEQ AIEYVYNHPM SS

Best Arabidopsis Sequence Match ( AT2G44620.1 )
(BLAST)

001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS

Arabidopsis Description

MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.