Factsheet for Solyc02g036290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1
peroxisome 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g067890.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04320.1	Solyc01g067890.2.1	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055277	Potato	cytosol, mitochondrion, nucleus	80.77	40.19
CDX94547	Canola	cytosol, mitochondrion, nucleus	38.46	21.05
GSMUA_AchrUn_...	Banana	mitochondrion	53.85	20.44
VIT_10s0116g00870.t01	Wine grape	mitochondrion	63.46	11.91
AT4G04320.1	Thale cress	mitochondrion	58.65	11.78
KRH11486	Soybean	mitochondrion	60.58	11.73
KRH36502	Soybean	mitochondrion	60.58	11.69
CDX90855	Canola	mitochondrion	58.65	11.53
CDY21296	Canola	mitochondrion	58.65	11.53
Os09t0394100-01	Rice	endoplasmic reticulum, mitochondrion	52.88	10.7
Zm00001d005711_P005	Maize	mitochondrion	50.96	10.29
TraesCS5D01G208800.1	Wheat	mitochondrion	50.0	10.22
OQU89456	Sorghum	mitochondrion, plastid	50.96	10.21
TraesCS5B01G201000.1	Wheat	mitochondrion	49.04	10.02
TraesCS5A01G202500.1	Wheat	mitochondrion	48.08	9.82
HORVU5Hr1G060110.16	Barley	plastid	50.0	9.29
Bra000788.1-P	Field mustard	mitochondrion	59.62	6.64
GSMUA_AchrUn_...	Banana	extracellular, mitochondrion, plastid	0.96	0.43
PGSC0003DMT400055273	Potato	plastid, vacuole	0.96	0.28
Solyc02g036300.2.1	Tomato	mitochondrion	0.0	0.0
Solyc02g036310.2.1	Tomato	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc02g036290.2.1	EnsemblPlantsGene:Solyc02g036290.2	Gene3D:3.40.630.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0050080
InterPro:Malonyl_CoA_deC	InterPro:Malonyl_CoA_deC_C	KEGG:00410+4.1.1.9	KEGG:00640+4.1.1.9	PANTHER:PTHR28641	PFAM:PF05292
UniParc:UPI0002767730	UniProt:K4B5S2	MapMan:5.1.2.4	:	:	:

Description

No Description!

Coordinates

chr2:-:30484868..30489871

Molecular Weight (calculated)

11748.2 Da

IEP (calculated)

9.751

GRAVY (calculated)

-0.406

Length

104 amino acids

Sequence
(BLAST)

001: MHHSSDLGSS GIEVMWNVLT SKNHEWTNSP NVLSALRALM MRLCARYLMK EKKRGKALDS VANFHLQNGA MIGRLNWMAD RSQNGLTQSE GIMVDKGYPD
101: HIFT

Best Arabidopsis Sequence Match ( AT4G04320.1 )
(BLAST)

001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL

Arabidopsis Description

Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.