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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:peroxisome
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90855 Canola mitochondrion 89.58 87.71
CDY21296 Canola mitochondrion 89.19 87.33
KRH11486 Soybean mitochondrion 69.11 66.67
KRH36502 Soybean mitochondrion 68.53 65.86
VIT_10s0116g00870.t01 Wine grape mitochondrion 69.31 64.8
PGSC0003DMT400055277 Potato cytosol, mitochondrion, nucleus 24.32 60.29
GSMUA_AchrUn_... Banana extracellular, mitochondrion, plastid 27.03 60.09
Solyc02g036290.2.1 Tomato cytosol, nucleus, peroxisome, plastid 11.78 58.65
Solyc02g036300.2.1 Tomato mitochondrion 11.39 56.19
PGSC0003DMT400055273 Potato plastid, vacuole 37.64 55.56
Zm00001d005711_P005 Maize mitochondrion 55.21 55.53
TraesCS5A01G202500.1 Wheat mitochondrion 54.44 55.4
TraesCS5B01G201000.1 Wheat mitochondrion 54.44 55.4
OQU89456 Sorghum mitochondrion, plastid 55.41 55.3
Os09t0394100-01 Rice endoplasmic reticulum, mitochondrion 54.63 55.06
TraesCS5D01G208800.1 Wheat mitochondrion 54.05 55.01
HORVU5Hr1G060110.16 Barley plastid 54.83 50.71
GSMUA_AchrUn_... Banana mitochondrion 25.48 48.18
Bra000788.1-P Field mustard mitochondrion 85.91 47.64
Solyc02g036310.2.1 Tomato mitochondrion 9.27 41.03
Protein Annotations
KEGG:00410+4.1.1.9KEGG:00640+4.1.1.9Gene3D:1.20.140.90Gene3D:3.40.630.150MapMan:5.1.2.4EntrezGene:825752
ProteinID:AEE82377.1EMBL:AK229719ArrayExpress:AT4G04320EnsemblPlantsGene:AT4G04320RefSeq:AT4G04320TAIR:AT4G04320
RefSeq:AT4G04320-TAIR-GEnsemblPlants:AT4G04320.1TAIR:AT4G04320.1Unigene:At.63645EMBL:BT008686GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0050080InterPro:IPR038351InterPro:MCD_NInterPro:MCD_N_sfInterPro:Malonyl_CoA_deCInterPro:Malonyl_CoA_deC_C
RefSeq:NP_192341.2PFAM:PF05292PFAM:PF17408PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281PANTHER:PTHR28641UniProt:Q7Y1Z8UniParc:UPI000016299D::
Description
Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
Coordinates
chr4:+:2113341..2116693
Molecular Weight (calculated)
58455.3 Da
IEP (calculated)
7.423
GRAVY (calculated)
-0.266
Length
518 amino acids
Sequence
(BLAST)
001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.