Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
23257241
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os05t0408900-03 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G04320.1 | Os05t0408900-03 | AT4G15560.1 | 24104567 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G208800.1 | Wheat | mitochondrion | 80.35 | 81.14 |
| TraesCS5A01G202500.1 | Wheat | mitochondrion | 80.16 | 80.94 |
| TraesCS5B01G201000.1 | Wheat | mitochondrion | 79.96 | 80.75 |
| OQU89456 | Sorghum | mitochondrion, plastid | 81.13 | 80.35 |
| Zm00001d005711_P005 | Maize | mitochondrion | 79.96 | 79.81 |
| HORVU5Hr1G060110.16 | Barley | plastid | 81.13 | 74.46 |
| GSMUA_AchrUn_... | Banana | extracellular, mitochondrion, plastid | 28.21 | 62.23 |
| Solyc02g036300.2.1 | Tomato | mitochondrion | 11.67 | 57.14 |
| PGSC0003DMT400055277 | Potato | cytosol, mitochondrion, nucleus | 22.57 | 55.5 |
| VIT_10s0116g00870.t01 | Wine grape | mitochondrion | 59.14 | 54.87 |
| KRH11486 | Soybean | mitochondrion | 57.2 | 54.75 |
| AT4G04320.1 | Thale cress | mitochondrion | 55.06 | 54.63 |
| KRH36502 | Soybean | mitochondrion | 57.0 | 54.36 |
| CDY21296 | Canola | mitochondrion | 55.25 | 53.69 |
| CDX90855 | Canola | mitochondrion | 55.06 | 53.5 |
| Solyc02g036290.2.1 | Tomato | cytosol, nucleus, peroxisome, plastid | 10.7 | 52.88 |
| CDX94547 | Canola | cytosol, mitochondrion, nucleus | 18.09 | 48.95 |
| PGSC0003DMT400055273 | Potato | plastid, vacuole | 32.88 | 48.15 |
| Bra000788.1-P | Field mustard | mitochondrion | 53.11 | 29.23 |
| Solyc02g036310.2.1 | Tomato | mitochondrion | 6.42 | 28.21 |
Protein Annotations
| KEGG:00410+4.1.1.9 | KEGG:00640+4.1.1.9 | Gene3D:1.20.140.90 | Gene3D:3.40.630.150 | MapMan:5.1.2.4 | ProteinID:BAD26492.1 |
| ProteinID:BAD26549.1 | ProteinID:BAF25005.1 | ProteinID:BAT07923.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0050080 | InterPro:IPR038351 |
| InterPro:MCD_N | InterPro:MCD_N_sf | InterPro:Malonyl_CoA_deC | InterPro:Malonyl_CoA_deC_C | EnsemblPlantsGene:Os09g0394100 | EnsemblPlants:Os09t0394100-01 |
| PFAM:PF05292 | PFAM:PF17408 | PANTHER:PTHR28641 | UniProt:Q6H400 | UniParc:UPI00003B471B | SEG:seg |
Description
Malonyl-CoA decarboxylase family protein. (Os09t0394100-01)
Coordinates
chr9:-:13626143..13629832
Molecular Weight (calculated)
56445.1 Da
IEP (calculated)
7.162
GRAVY (calculated)
-0.195
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRNHSPKSL AVLLRARMHP DPVSPAPPPP APTAAAAPDP DPSAPPAAAA VRHWLHASVS SSASTALDRF SDGYRSLDRP GRREILRSLA ADYDVPRARV
101: RDLMRQYLSA AAAGGEEEEE EHPEAGGGGG SASAMYRMER GLREALRPKY AGFLEAMNAQ PGGLKLLAVI RADLLALLGE ENLPALRALD GYLKEKLVTW
201: LSPAALTLHQ ITWDDPASLL EKIVAYEAVH PIRNLIDLKR RLGVGRRCFG YFHPAIPGEP LIFIEVALLK DTAASIQEVL WDDPPTPESE ARCALFYSIS
301: STQPGLSGIN LGKFLLKRVI EMLRRDMPSV QIFATLSPIP GFMQWLLAKL ASQIKLAEAE SQDGSLLEGT SSTFRESILF PEEERMIHDA VEHAGGKSGI
401: KLLQDILKSS QWVKSDKLSS ALKSPLMRLC ARYLAREKKR GKALDAVANF HLQNGAMIER INWMADQSEK GIQQSGGIMV NYMYRLENIE EYALSYLGTG
501: LAHTSSNLLQ YIEV
101: RDLMRQYLSA AAAGGEEEEE EHPEAGGGGG SASAMYRMER GLREALRPKY AGFLEAMNAQ PGGLKLLAVI RADLLALLGE ENLPALRALD GYLKEKLVTW
201: LSPAALTLHQ ITWDDPASLL EKIVAYEAVH PIRNLIDLKR RLGVGRRCFG YFHPAIPGEP LIFIEVALLK DTAASIQEVL WDDPPTPESE ARCALFYSIS
301: STQPGLSGIN LGKFLLKRVI EMLRRDMPSV QIFATLSPIP GFMQWLLAKL ASQIKLAEAE SQDGSLLEGT SSTFRESILF PEEERMIHDA VEHAGGKSGI
401: KLLQDILKSS QWVKSDKLSS ALKSPLMRLC ARYLAREKKR GKALDAVANF HLQNGAMIER INWMADQSEK GIQQSGGIMV NYMYRLENIE EYALSYLGTG
501: LAHTSSNLLQ YIEV
001: MSKKNLAILL RARMRSNNPS KFSLSQFPEI QSNPQENHSR DHIVQNSNDF GTTGRVYDVV RETMHSAISA SKTGVLDITL NDFQEGYFSL SLEDREKLLL
101: VLAKEYDVNR EQVRELVKQY LGLETPASDD DKGALSSVFY RIERNLRHAL RPTYEVLFER LNTHPGGLRF LSILRADLLS ILSKENTPSL RTLDSFLKEK
201: LGMWLSPATL ELHQITWDDP ASLLEKIVAY EAVHPISNLL DLKRRLGIGR RCFGYFHPSV PGEPLIFIEV ALMETVAQTI QEVLWDNPPI PENQATCALF
301: YSISSTQPGL AGINLGKFLI KRVITLVKKD MPHVSTFATL SPIPGFMQWL LSKLSSQSRF AEDERGTQSN SPSSTFSEKV LLPEEEHALM TLSDESSSGS
401: NGMEVLLNLL SVKNCDWATS PRLLPVLEPI LMRLCARYLL QEKKRGKALD SVANFHLQNG AMVERINWMA DRSEKGIRQS GGIMVNYVYR LENIEDYAQS
501: YFGSGKIHAS PGIHSRL
101: VLAKEYDVNR EQVRELVKQY LGLETPASDD DKGALSSVFY RIERNLRHAL RPTYEVLFER LNTHPGGLRF LSILRADLLS ILSKENTPSL RTLDSFLKEK
201: LGMWLSPATL ELHQITWDDP ASLLEKIVAY EAVHPISNLL DLKRRLGIGR RCFGYFHPSV PGEPLIFIEV ALMETVAQTI QEVLWDNPPI PENQATCALF
301: YSISSTQPGL AGINLGKFLI KRVITLVKKD MPHVSTFATL SPIPGFMQWL LSKLSSQSRF AEDERGTQSN SPSSTFSEKV LLPEEEHALM TLSDESSSGS
401: NGMEVLLNLL SVKNCDWATS PRLLPVLEPI LMRLCARYLL QEKKRGKALD SVANFHLQNG AMVERINWMA DRSEKGIRQS GGIMVNYVYR LENIEDYAQS
501: YFGSGKIHAS PGIHSRL
Arabidopsis Description
Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.