CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16674	Canola	cytosol	21.05	80.0
Solyc02g036290.2.1	Tomato	cytosol, nucleus, peroxisome, plastid	21.05	38.46
PGSC0003DMT400055277	Potato	cytosol, mitochondrion, nucleus	28.95	26.32
GSMUA_AchrUn_...	Banana	mitochondrion	34.21	23.72
CDX90855	Canola	mitochondrion	57.89	20.79
CDY21296	Canola	mitochondrion	57.89	20.79
TraesCS5A01G202500.1	Wheat	mitochondrion	48.95	18.27
TraesCS5B01G201000.1	Wheat	mitochondrion	48.95	18.27
Os09t0394100-01	Rice	endoplasmic reticulum, mitochondrion	48.95	18.09
TraesCS5D01G208800.1	Wheat	mitochondrion	48.42	18.07
VIT_10s0116g00870.t01	Wine grape	mitochondrion	52.63	18.05
OQU89456	Sorghum	mitochondrion, plastid	48.95	17.92
Zm00001d005711_P005	Maize	mitochondrion	48.42	17.86
HORVU5Hr1G060110.16	Barley	plastid	49.47	16.79
GSMUA_AchrUn_...	Banana	extracellular, mitochondrion, plastid	17.37	14.16
Solyc02g036300.2.1	Tomato	mitochondrion	6.84	12.38
PGSC0003DMT400055273	Potato	plastid, vacuole	17.89	9.69
Solyc02g036310.2.1	Tomato	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00410+4.1.1.9	KEGG:00640+4.1.1.9	Gene3D:3.40.630.150	MapMan:5.1.2.4	GO:A0A078E089	EnsemblPlants:CDX94547
ProteinID:CDX94547	ProteinID:CDX94547.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0050080	EnsemblPlantsGene:GSBRNA2T00157797001
InterPro:Malonyl_CoA_deC	InterPro:Malonyl_CoA_deC_C	PFAM:PF05292	PANTHER:PTHR28641	UniPathway:UPA00340	UniParc:UPI0004EED603

Description

BnaC09g22890D

Coordinates

chrLK031882:+:941377..942338

Molecular Weight (calculated)

21682.7 Da

IEP (calculated)

7.631

GRAVY (calculated)

-0.444

Length

190 amino acids

Sequence
(BLAST)

001: MWLSPATLEL YHITWDDSAS LLEKQFHTLR SLMRYAAVTS YQRPFGSQKK ILGIGRRCRH LQHLAPSLNS CNGSSQTSHL TSRFGEDEGG GTQSNSTSFS
101: ENVLLPEEEQ TLMSPDSSSE PILMWFCARY LLQEEKRGKT LDSVANFHLQ NVAMVERINW MADRSKKSIH LSGGIVVKYV YRLENIEYYA

Best Arabidopsis Sequence Match ( AT4G04320.1 )
(BLAST)

001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL

Arabidopsis Description

Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.