Factsheet for GSMUA_AchrUn_randomP18410_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P24940_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04320.1	GSMUA_Achr10P...	AT4G15560.1	24104567
AT4G04320.1	GSMUA_Achr3P24940_001	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055277	Potato	cytosol, mitochondrion, nucleus	43.07	56.46
Solyc02g036290.2.1	Tomato	cytosol, nucleus, peroxisome, plastid	20.44	53.85
CDX94547	Canola	cytosol, mitochondrion, nucleus	23.72	34.21
Solyc02g036300.2.1	Tomato	mitochondrion	12.04	31.43
VIT_10s0116g00870.t01	Wine grape	mitochondrion	54.38	26.9
KRH11486	Soybean	mitochondrion	50.73	25.88
AT4G04320.1	Thale cress	mitochondrion	48.18	25.48
KRH36502	Soybean	mitochondrion	50.0	25.42
CDX90855	Canola	mitochondrion	47.81	24.76
CDY21296	Canola	mitochondrion	47.81	24.76
Bra000788.1-P	Field mustard	mitochondrion	44.16	12.96
GSMUA_AchrUn_...	Banana	extracellular, mitochondrion, plastid	4.01	4.72
PGSC0003DMT400055273	Potato	plastid, vacuole	4.01	3.13
Solyc02g036310.2.1	Tomato	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP18410_001	EnsemblPlants:GSMUA_AchrUn_randomT18410_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG18410_001	Gene3D:3.40.630.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0050080	InterPro:Malonyl_CoA_deC	InterPro:Malonyl_CoA_deC_C	KEGG:00410+4.1.1.9	KEGG:00640+4.1.1.9	PANTHER:PTHR28641
PFAM:PF05292	UniParc:UPI0002958AA7	UniProt:M0UAA0	MapMan:5.1.2.4	:	:

Description

Putative Malonyl-CoA decarboxylase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18410_001]

Coordinates

chrchrUn_random:+:87681770..87702616

Molecular Weight (calculated)

31726.7 Da

IEP (calculated)

8.724

GRAVY (calculated)

-0.316

Length

274 amino acids

Sequence
(BLAST)

001: MHLNPLGSYK FVHQRTMVII LQNFRLLCRK SDHYIKIPGL SGINLGKFLI KRVIHLLRRD MPHISIFATL SPIPGYMHWL LPKFASQIKL SKLETEDMKH
101: FSEKGSGSNF IEDLLLPEEK EMILSGYLKW LQSGTASEIE FDKSECMDTR EHDSGKDVME IMYKLLTSRE WNKSDILSEA LKPPLLRLCA RYILKEKKRG
201: KALDVVANFH LQNGSMIERL NWMADSSDKG IEQSGGIMVN YVYRLDRIDE YAQSYLNTGH IHASSSLHQY LELH

Best Arabidopsis Sequence Match ( AT4G04320.1 )
(BLAST)

001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL

Arabidopsis Description

Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.