Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • nucleus 2
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g067890.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G04320.1 Solyc01g067890.2.1 AT4G15560.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400055273 Potato plastid, vacuole 79.49 26.5
VIT_10s0116g00870.t01 Wine grape mitochondrion 55.56 11.73
KRH36502 Soybean mitochondrion 52.99 11.5
KRH11486 Soybean mitochondrion 51.28 11.17
AT4G04320.1 Thale cress mitochondrion 41.03 9.27
CDX90855 Canola mitochondrion 41.88 9.26
CDY21296 Canola mitochondrion 41.88 9.26
Os09t0394100-01 Rice endoplasmic reticulum, mitochondrion 28.21 6.42
TraesCS5D01G208800.1 Wheat mitochondrion 27.35 6.29
TraesCS5B01G201000.1 Wheat mitochondrion 27.35 6.29
TraesCS5A01G202500.1 Wheat mitochondrion 27.35 6.29
HORVU5Hr1G060110.16 Barley plastid 29.06 6.07
OQU89456 Sorghum mitochondrion, plastid 26.5 5.97
Zm00001d005711_P005 Maize mitochondrion 24.79 5.63
Bra000788.1-P Field mustard mitochondrion 42.73 5.35
GSMUA_AchrUn_... Banana extracellular, mitochondrion, plastid 6.84 3.43
Solyc02g036290.2.1 Tomato cytosol, nucleus, peroxisome, plastid 0.0 0.0
Solyc02g036300.2.1 Tomato mitochondrion 0.0 0.0
PGSC0003DMT400055277 Potato cytosol, mitochondrion, nucleus 0.0 0.0
GSMUA_AchrUn_... Banana mitochondrion 0.0 0.0
CDX94547 Canola cytosol, mitochondrion, nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc02g036310.2.1EnsemblPlantsGene:Solyc02g036310.2Gene3D:1.20.140.90InterPro:IPR038351InterPro:MCD_N_sfKEGG:00410+4.1.1.9
KEGG:00640+4.1.1.9UniParc:UPI0002767732UniProt:K4B5S4MapMan:5.1.2.4::
Description
No Description!
Coordinates
chr2:-:30492128..30493367
Molecular Weight (calculated)
13456.0 Da
IEP (calculated)
5.175
GRAVY (calculated)
-0.518
Length
117 amino acids
Sequence
(BLAST)
001: MNKKGLAILM RTKMRLLSPT FASFSQVRES MHSAMSTNKT EIVNVALDEF SEGYLLFSPE NRYNMLLSLA KEYDLNWTQV RELMKQHLDL QLPNDKAEDS
101: GHEEEDHYQL STGLSGI
Best Arabidopsis Sequence Match ( AT4G04320.2 )
(BLAST)
001: MSKKNLAILL RARMRSNNPS KFSLSQFPEI QSNPQENHSR DHIVQNSNDF GTTGRVYDVV RETMHSAISA SKTGVLDITL NDFQEGYFSL SLEDREKLLL
101: VLAKEYDVNR EQVRELVKQY LGLETPASDD DKGALSSVFY RIERNLRHAL RPTYEVLFER LNTHPGGLRF LSILRADLLS ILSKENTPSL RTLDSFLKEK
201: LGMWLSPATL ELHQITWDDP ASLLEKIVAY EAVHPISNLL DLKRRLGIGR RCFGYFHPSV PGEPLIFIEV ALMETVAQTI QEVLWDNPPI PENQATCALF
301: YSISSTQPGL AGINLGKFLI KRVITLVKKD MPHVSTFATL SPIPGFMQWL LSKLSSQSRF AEDERGTQSN SPSSTFSEKV LLPEEEHALM TLSDESSSGS
401: NGMEVLLNLL SVKNCDWATS PRLLPVLEPI LMRLCARYLL QEKKRGKALD SVANFHLQNG AMVERINWMA DRSEKGIRQS GGIMVNYVYR LENIEDYAQS
501: YFGSGKIHAS PGIHSRL
Arabidopsis Description
Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.