Factsheet for HORVU5Hr1G060110.16

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G060610.9

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04320.1	HORVU1Hr1G060610.9	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G201000.1	Wheat	mitochondrion	87.5	96.27
TraesCS5D01G208800.1	Wheat	mitochondrion	86.61	95.28
TraesCS5A01G202500.1	Wheat	mitochondrion	86.61	95.28
Os09t0394100-01	Rice	endoplasmic reticulum, mitochondrion	74.46	81.13
Zm00001d005711_P005	Maize	mitochondrion	73.04	79.42
OQU89456	Sorghum	mitochondrion, plastid	73.57	79.38
GSMUA_AchrUn_...	Banana	extracellular, mitochondrion, plastid	25.36	60.94
Solyc02g036300.2.1	Tomato	mitochondrion	10.89	58.1
AT4G04320.1	Thale cress	mitochondrion	50.71	54.83
PGSC0003DMT400055277	Potato	cytosol, mitochondrion, nucleus	20.18	54.07
KRH11486	Soybean	mitochondrion	51.79	54.0
CDY21296	Canola	mitochondrion	50.89	53.88
CDX90855	Canola	mitochondrion	50.89	53.88
KRH36502	Soybean	mitochondrion	51.79	53.8
VIT_10s0116g00870.t01	Wine grape	mitochondrion	52.32	52.89
Solyc02g036290.2.1	Tomato	cytosol, nucleus, peroxisome, plastid	9.29	50.0
CDX94547	Canola	cytosol, mitochondrion, nucleus	16.79	49.47
PGSC0003DMT400055273	Potato	plastid, vacuole	29.82	47.58
Bra000788.1-P	Field mustard	mitochondrion	48.75	29.23
Solyc02g036310.2.1	Tomato	mitochondrion	6.07	29.06

Protein Annotations

KEGG:00410+4.1.1.9	KEGG:00640+4.1.1.9	Gene3D:1.20.140.90	Gene3D:3.40.630.150	MapMan:5.1.2.4	UniProt:A0A287REP9
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0050080	EnsemblPlantsGene:HORVU5Hr1G060110	EnsemblPlants:HORVU5Hr1G060110.16	InterPro:IPR038351
InterPro:MCD_N	InterPro:MCD_N_sf	InterPro:Malonyl_CoA_deC	InterPro:Malonyl_CoA_deC_C	PFAM:PF05292	PFAM:PF17408
PANTHER:PTHR28641	UniParc:UPI000B484077	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:470603575..470607352

Molecular Weight (calculated)

61779.6 Da

IEP (calculated)

8.656

GRAVY (calculated)

-0.209

Length

560 amino acids

Sequence
(BLAST)

001: AEPNRIVGAP PPFVLFNPPS WQPPSARAPV TPPFLTTSSF HRRWRQPRSH RMTRSHTPKS LAVLLRARMH PDSIPSPLPA PSPPASPDPN PSARPAAASS
101: VRHWLHASIS AASPPPAALE CFSDGYRSLD RGGRHEILRS LATDYDVPRA RVRDLMRQYL SVSATGEDGD EQPRAEREEG GAASALYRME RGLRDALRPK
201: HAGFLEAMNA QPGGLKLLAV IRADLLALLG EENAPVLRAL DGYLKEKLVT WLSPAALALH QITWDDPASL LEKIVAYEAV HPIRNLIDLK RRLGVGRRCF
301: GYFHPAIPGE PLIFIEVALL KDMATSIQEV LLDVPPIAEC EAKCALFYSI SSTQPGLSGI NLGKFLLKRV IDMLRKDMPS VQIFATLSPI PGFMQWLLAK
401: LASQIKLAEA EMQEGNSLEG ASSTFRESIL FPEEEKMIHS AIDQVDGKQG IELLQDILKS SQWVKSDKLS AALKSPLMRL CARYLTREKI RGKALDAVAN
501: FHLQNGAMVE RINWMADQSE KGIEQSGGIM VNYLYRLENI EEYASSYSAT GLIHTSPSLS

Best Arabidopsis Sequence Match ( AT4G04320.1 )
(BLAST)

001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL

Arabidopsis Description

Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.