Factsheet for Zm00001d005711_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038170_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04320.1	Zm00001d038170_P001	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89456	Sorghum	mitochondrion, plastid	90.1	89.4
TraesCS5D01G208800.1	Wheat	mitochondrion	79.22	80.16
Os09t0394100-01	Rice	endoplasmic reticulum, mitochondrion	79.81	79.96
TraesCS5A01G202500.1	Wheat	mitochondrion	78.83	79.76
TraesCS5B01G201000.1	Wheat	mitochondrion	77.86	78.78
HORVU5Hr1G060110.16	Barley	plastid	79.42	73.04
GSMUA_AchrUn_...	Banana	extracellular, mitochondrion, plastid	27.77	61.37
Solyc02g036300.2.1	Tomato	mitochondrion	11.65	57.14
AT4G04320.1	Thale cress	mitochondrion	55.53	55.21
PGSC0003DMT400055277	Potato	cytosol, mitochondrion, nucleus	22.14	54.55
CDY21296	Canola	mitochondrion	55.34	53.88
KRH11486	Soybean	mitochondrion	55.92	53.63
KRH36502	Soybean	mitochondrion	56.12	53.62
CDX90855	Canola	mitochondrion	54.95	53.5
VIT_10s0116g00870.t01	Wine grape	mitochondrion	56.5	52.53
Solyc02g036290.2.1	Tomato	cytosol, nucleus, peroxisome, plastid	10.29	50.96
CDX94547	Canola	cytosol, mitochondrion, nucleus	17.86	48.42
PGSC0003DMT400055273	Potato	plastid, vacuole	32.04	47.01
Bra000788.1-P	Field mustard	mitochondrion	52.43	28.91
Solyc02g036310.2.1	Tomato	mitochondrion	5.63	24.79

Protein Annotations

KEGG:00410+4.1.1.9	KEGG:00640+4.1.1.9	Gene3D:1.20.140.90	EntrezGene:103647398	Gene3D:3.40.630.150	MapMan:5.1.2.4
UniProt:A0A1D6EPK6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0050080	InterPro:IPR038351	InterPro:MCD_N	InterPro:MCD_N_sf
InterPro:Malonyl_CoA_deC	InterPro:Malonyl_CoA_deC_C	ProteinID:ONM21699.1	PFAM:PF05292	PFAM:PF17408	PANTHER:PTHR28641
UniParc:UPI0004DEA32F	EnsemblPlantsGene:Zm00001d005711	EnsemblPlants:Zm00001d005711_P005	EnsemblPlants:Zm00001d005711_T005	SEG:seg	:

Description

malonyl-CoA decarboxylase family protein

Coordinates

chr2:-:184164810..184174451

Molecular Weight (calculated)

56881.6 Da

IEP (calculated)

6.269

GRAVY (calculated)

-0.192

Length

515 amino acids

Sequence
(BLAST)

001: MTRHNISKSL AVVLRARMQP NPISSPPPPT PPPPPTDPDP AAPLVASVSH WLHVSASAAS PPPAALDSFS DGYRSLDLVG RREVLRSLAV DYDVPRARVR
101: DLMKQYMSVT SAEPSGVDDV EAEEGKEGAA SALYRMERGL RDALRPRYAG FLEAMNAQPG GLKLLAVLRA DLLALLGEEN VSALRALDSY LKEKLVTWLS
201: PAALTLHQIT WDDPASLLEK IVAYEAVHPI RNLIDLKRRL GIGRRCFGYF HPAIPGEPLI FIEVALLKDM EASIQEVLWD DPPTPESEAS CALFYSISST
301: QPGLSGINLG KFLLKRVIDM LRRDMPSVQN FATLSPIPGL MQWLLAKLAS QIKLSEAESR EGNSLGACST FKESILLPDE ERMIHDAIEQ ADGKQGIELL
401: QDILKSRQWV KSDKLSAALK SPLMRLCARY LAREKKRGKA LDAVANFHLQ NGAMIERINW MADQSEKGIQ QSGGIMVNYL YRLENIEEYA LSYSSTGLIH
501: SSPSLSEYLE QPKDL

Best Arabidopsis Sequence Match ( AT4G04320.1 )
(BLAST)

001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL

Arabidopsis Description

Malonyl-CoA decarboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y1Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.