Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G202500.1 | |
| TraesCS5B01G201000.1 | |
| TraesCS5D01G208800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44620.1 | TraesCS5A01G202500.1 | AT4G04320.1 | 21798944 |
| AT2G44620.1 | TraesCS5B01G201000.1 | AT4G04320.1 | 21798944 |
| AT2G44620.1 | TraesCS5D01G208800.1 | AT4G04320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G183300.1 | Wheat | mitochondrion | 99.24 | 99.24 |
| TraesCS7A01G181900.2 | Wheat | mitochondrion | 94.7 | 96.9 |
| HORVU7Hr1G037330.2 | Barley | mitochondrion | 93.94 | 93.94 |
| Os07t0222800-01 | Rice | mitochondrion | 87.12 | 87.79 |
| EER96074 | Sorghum | mitochondrion | 86.36 | 85.07 |
| Zm00001d019186_P001 | Maize | mitochondrion | 83.33 | 82.71 |
| Solyc01g088570.2.1 | Tomato | mitochondrion | 62.88 | 68.03 |
| PGSC0003DMT400004235 | Potato | mitochondrion | 62.12 | 67.21 |
| KRH00978 | Soybean | mitochondrion | 57.58 | 65.52 |
| KRH40249 | Soybean | mitochondrion | 57.58 | 65.52 |
| CDX95607 | Canola | mitochondrion | 59.09 | 65.0 |
| CDX83424 | Canola | mitochondrion | 59.09 | 65.0 |
| AT2G44620.1 | Thale cress | mitochondrion | 59.09 | 63.93 |
| Bra000356.1-P | Field mustard | mitochondrion | 57.58 | 63.33 |
| CDX74673 | Canola | mitochondrion | 59.09 | 62.4 |
| Bra004851.1-P | Field mustard | mitochondrion | 59.09 | 62.4 |
| VIT_15s0021g00570.t01 | Wine grape | mitochondrion | 58.33 | 62.1 |
| GSMUA_Achr2P00030_001 | Banana | mitochondrion | 57.58 | 60.8 |
| CDY48242 | Canola | mitochondrion | 57.58 | 60.8 |
| TraesCS1B01G249700.1 | Wheat | mitochondrion | 49.24 | 50.78 |
| TraesCS4B01G161900.1 | Wheat | mitochondrion | 48.48 | 48.12 |
Protein Annotations
| Gene3D:1.10.1200.10 | MapMan:5.1.5.1 | InterPro:ACP-like_sf | InterPro:Acyl_carrier | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR009081 | InterPro:IPR036736 |
| HAMAP:MF_01217 | PFAM:PD000887 | PFAM:PF00550 | InterPro:PP-bd_ACP | ScanProsite:PS00012 | PFscan:PS50075 |
| PANTHER:PTHR20863 | PANTHER:PTHR20863:SF41 | InterPro:Ppantetheine_attach_site | SUPFAM:SSF47336 | TIGRFAMs:TIGR00517 | EnsemblPlantsGene:TraesCS7B01G086700 |
| EnsemblPlants:TraesCS7B01G086700.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:100027424..100027907
Molecular Weight (calculated)
14151.2 Da
IEP (calculated)
5.527
GRAVY (calculated)
0.108
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAALRPAI LRHIRLSPAT AAPLAAAAAA GRPLALAPWL ARPMSSHDAH LTRDEVVGRV LDVLKCHPKV DPSKVTPEAH FEKDLGLDSL DTVEVVMAIE
101: EEFKLEIPDL EADKINSLPL AIEYVANHPM AG
101: EEFKLEIPDL EADKINSLPL AIEYVANHPM AG
001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS
101: EADKIDSCSL AIEYVYNHPM SS
Arabidopsis Description
MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.