Factsheet for Zm00001d019186_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005711_P005

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44620.1	Zm00001d005711_P005	AT4G04320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0222800-01	Rice	mitochondrion	86.47	87.79
EER96074	Sorghum	mitochondrion	87.22	86.57
HORVU7Hr1G037330.2	Barley	mitochondrion	84.21	84.85
TraesCS7A01G181900.2	Wheat	mitochondrion	81.95	84.5
TraesCS7B01G086700.1	Wheat	mitochondrion	82.71	83.33
TraesCS7D01G183300.1	Wheat	mitochondrion	81.95	82.58
Solyc01g088570.2.1	Tomato	mitochondrion	60.15	65.57
PGSC0003DMT400004235	Potato	mitochondrion	59.4	64.75
AT2G44620.1	Thale cress	mitochondrion	57.89	63.11
CDX83424	Canola	mitochondrion	56.39	62.5
CDX95607	Canola	mitochondrion	56.39	62.5
VIT_15s0021g00570.t01	Wine grape	mitochondrion	57.14	61.29
KRH00978	Soybean	mitochondrion	53.38	61.21
KRH40249	Soybean	mitochondrion	53.38	61.21
Bra000356.1-P	Field mustard	mitochondrion	54.89	60.83
CDX74673	Canola	mitochondrion	57.14	60.8
Bra004851.1-P	Field mustard	mitochondrion	57.14	60.8
CDY48242	Canola	mitochondrion	55.64	59.2
GSMUA_Achr2P00030_001	Banana	mitochondrion	54.89	58.4
Zm00001d048163_P001	Maize	mitochondrion	50.38	51.15
Zm00001d038057_P002	Maize	mitochondrion	45.11	47.24
Zm00001d033149_P001	Maize	mitochondrion	32.33	31.62

Protein Annotations

Gene3D:1.10.1200.10	EntrezGene:100286300	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	UniProt:B6UHG1
EMBL:BT064390	EMBL:EU976676	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR009081	InterPro:IPR036736	HAMAP:MF_01217	ProteinID:ONM52435.1
PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863
PANTHER:PTHR20863:SF41	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniParc:UPI000182FE06	EnsemblPlantsGene:Zm00001d019186
EnsemblPlants:Zm00001d019186_P001	EnsemblPlants:Zm00001d019186_T001	SEG:seg	:	:	:

Description

Acyl carrier protein

Coordinates

chr7:+:20833596..20834758

Molecular Weight (calculated)

14470.5 Da

IEP (calculated)

5.510

GRAVY (calculated)

-0.080

Length

133 amino acids

Sequence
(BLAST)

001: MAAAALRPAI LRRIRLSPSP SLALAAAGTG ASHPHALGRW LARPMSSHDA HLTRDEVIDR ILDVIKSHPK IDPSKVTPEA HFEKDLGLDS LDTVEVVMAI
101: EEEFKLEIPD MEADKIDSLP LAIEYVANHP MAG

Best Arabidopsis Sequence Match ( AT2G44620.1 )
(BLAST)

001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS

Arabidopsis Description

MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.