Factsheet for GSMUA_Achr2P00030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44620.1	GSMUA_AchrUn_...	AT4G04320.1	21798944
AT2G44620.1	GSMUA_AchrUn_...	AT4G04320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40249	Soybean	mitochondrion	68.0	73.28
KRH00978	Soybean	mitochondrion	68.0	73.28
VIT_15s0021g00570.t01	Wine grape	mitochondrion	71.2	71.77
CDX83424	Canola	mitochondrion	65.6	68.33
CDX95607	Canola	mitochondrion	65.6	68.33
AT2G44620.1	Thale cress	mitochondrion	66.4	68.03
Bra000356.1-P	Field mustard	mitochondrion	64.0	66.67
PGSC0003DMT400004235	Potato	mitochondrion	64.8	66.39
Solyc01g088570.2.1	Tomato	mitochondrion	64.0	65.57
CDY48242	Canola	mitochondrion	64.8	64.8
CDX74673	Canola	mitochondrion	64.0	64.0
Bra004851.1-P	Field mustard	mitochondrion	64.0	64.0
GSMUA_Achr10P...	Banana	cytosol	17.6	61.11
TraesCS7A01G181900.2	Wheat	mitochondrion	60.8	58.91
HORVU7Hr1G037330.2	Barley	mitochondrion	61.6	58.33
TraesCS7D01G183300.1	Wheat	mitochondrion	60.8	57.58
TraesCS7B01G086700.1	Wheat	mitochondrion	60.8	57.58
EER96074	Sorghum	mitochondrion	61.6	57.46
Os07t0222800-01	Rice	mitochondrion	59.2	56.49
Zm00001d019186_P001	Maize	mitochondrion	58.4	54.89
GSMUA_Achr8P22050_001	Banana	mitochondrion	51.2	50.79
GSMUA_Achr9P17820_001	Banana	mitochondrion	48.8	48.41
GSMUA_Achr1P11200_001	Banana	mitochondrion	46.4	46.4
GSMUA_Achr2P13680_001	Banana	mitochondrion	36.8	35.66

Protein Annotations

Gene3D:1.10.1200.10	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G00030_001	EnsemblPlants:GSMUA_Achr2P00030_001
EnsemblPlants:GSMUA_Achr2T00030_001	InterPro:IPR009081	InterPro:IPR036736	UniProt:M0S3U4	HAMAP:MF_01217	PFAM:PD000887
PFAM:PF00550	InterPro:PP-bd_ACP	PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF41	SUPFAM:SSF47336
TIGRFAMs:TIGR00517	UniParc:UPI000296A461	SEG:seg	:	:	:

Description

Acyl carrier protein, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr2G00030_001]

Coordinates

chr2:-:174712..175472

Molecular Weight (calculated)

13732.5 Da

IEP (calculated)

4.624

GRAVY (calculated)

-0.013

Length

125 amino acids

Sequence
(BLAST)

001: MASALRGAIL GHVRVPIRTL DRLGSLSCLQ TSIRSMSSHG DDHLTREEVV DRVLDVVKSF PKVDPAKVNP DVHFQTDLGL DSLDNVEIVM ALEEEFKLEI
101: PDKEADQIVS CPLAVEYIAA HPMAS

Best Arabidopsis Sequence Match ( AT2G44620.1 )
(BLAST)

001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS

Arabidopsis Description

MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.