Factsheet for VIT_15s0021g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_10s0116g00870.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44620.1	VIT_10s0116g00870.t01	AT4G04320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40249	Soybean	mitochondrion	75.0	80.17
KRH00978	Soybean	mitochondrion	75.0	80.17
GSMUA_Achr2P00030_001	Banana	mitochondrion	71.77	71.2
CDX83424	Canola	mitochondrion	67.74	70.0
CDX95607	Canola	mitochondrion	67.74	70.0
AT2G44620.1	Thale cress	mitochondrion	68.55	69.67
Bra000356.1-P	Field mustard	mitochondrion	66.13	68.33
PGSC0003DMT400004235	Potato	mitochondrion	66.13	67.21
Solyc01g088570.2.1	Tomato	mitochondrion	66.13	67.21
CDY48242	Canola	mitochondrion	66.94	66.4
CDX74673	Canola	mitochondrion	66.94	66.4
Bra004851.1-P	Field mustard	mitochondrion	66.94	66.4
TraesCS7A01G181900.2	Wheat	mitochondrion	62.1	59.69
EER96074	Sorghum	mitochondrion	63.71	58.96
HORVU7Hr1G037330.2	Barley	mitochondrion	62.1	58.33
TraesCS7B01G086700.1	Wheat	mitochondrion	62.1	58.33
TraesCS7D01G183300.1	Wheat	mitochondrion	62.1	58.33
Zm00001d019186_P001	Maize	mitochondrion	61.29	57.14
Os07t0222800-01	Rice	mitochondrion	59.68	56.49
VIT_04s0023g00840.t01	Wine grape	mitochondrion	50.0	48.82
VIT_00s0259g00160.t01	Wine grape	mitochondrion	37.9	34.81
VIT_08s0007g03490.t01	Wine grape	mitochondrion	37.1	33.09

Protein Annotations

Gene3D:1.10.1200.10	EntrezGene:100246253	wikigene:100246253	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier
ProteinID:CBI16727	ProteinID:CBI16727.3	UniProt:D7SM49	EMBL:FN594952	GO:GO:0000035	GO:GO:0000036
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009245	GO:GO:0009987	GO:GO:0031177	InterPro:IPR009081	InterPro:IPR036736
EntrezGene:LOC100246253	wikigene:LOC100246253	HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	InterPro:PP-bd_ACP
PFscan:PS50075	PANTHER:PTHR20863	PANTHER:PTHR20863:SF41	SUPFAM:SSF47336	TIGR:TC60364	TIGRFAMs:TIGR00517
UniParc:UPI00015C954B	ArrayExpress:VIT_15s0021g00570	EnsemblPlantsGene:VIT_15s0021g00570	EnsemblPlants:VIT_15s0021g00570.t01	unigene:Vvi.2004	RefSeq:XP_002266315
RefSeq:XP_002266315.1	:	:	:	:	:

Description

Acyl carrier protein [Source:UniProtKB/TrEMBL;Acc:D7SM49]

Coordinates

chr15:-:10246908..10257884

Molecular Weight (calculated)

14032.8 Da

IEP (calculated)

4.942

GRAVY (calculated)

-0.220

Length

124 amino acids

Sequence
(BLAST)

001: MALRAAILRH IRVPVLQTLA PASTASNWQR WIRPMSSHGD DHLQKEEVIE RVLSVVKSFP KVDPSQVTAD VHFQKDLGLD SLDNVEIVMA LEEEFKLEIP
101: DKEADKIDSC NLAIEYIYNH PMAG

Best Arabidopsis Sequence Match ( AT2G44620.1 )
(BLAST)

001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS

Arabidopsis Description

MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.