Factsheet for PGSC0003DMT400004235

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400055273
PGSC0003DMT400055277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44620.1	PGSC0003DMT400055273	AT4G04320.1	21798944
AT2G44620.1	PGSC0003DMT400055277	AT4G04320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g088570.2.1	Tomato	mitochondrion	97.54	97.54
CDX83424	Canola	mitochondrion	69.67	70.83
CDX95607	Canola	mitochondrion	69.67	70.83
Bra000356.1-P	Field mustard	mitochondrion	68.85	70.0
AT2G44620.1	Thale cress	mitochondrion	69.67	69.67
Bra004851.1-P	Field mustard	mitochondrion	68.03	66.4
CDX74673	Canola	mitochondrion	68.03	66.4
KRH40249	Soybean	mitochondrion	63.11	66.38
KRH00978	Soybean	mitochondrion	63.11	66.38
VIT_15s0021g00570.t01	Wine grape	mitochondrion	67.21	66.13
GSMUA_Achr2P00030_001	Banana	mitochondrion	66.39	64.8
CDY48242	Canola	mitochondrion	66.39	64.8
TraesCS7A01G181900.2	Wheat	mitochondrion	67.21	63.57
HORVU7Hr1G037330.2	Barley	mitochondrion	67.21	62.12
TraesCS7B01G086700.1	Wheat	mitochondrion	67.21	62.12
TraesCS7D01G183300.1	Wheat	mitochondrion	67.21	62.12
Os07t0222800-01	Rice	mitochondrion	64.75	60.31
Zm00001d019186_P001	Maize	mitochondrion	64.75	59.4
EER96074	Sorghum	mitochondrion	64.75	58.96
PGSC0003DMT400070136	Potato	mitochondrion	46.72	44.53
PGSC0003DMT400060304	Potato	mitochondrion	46.72	43.51
PGSC0003DMT400064261	Potato	mitochondrion	46.72	43.51
PGSC0003DMT400034738	Potato	mitochondrion	37.7	34.59

Protein Annotations

Gene3D:1.10.1200.10	EntrezGene:102585513	MapMan:5.1.5.1	InterPro:ACP-like_sf	InterPro:Acyl_carrier	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR009081
InterPro:IPR036736	UniProt:M0ZN39	HAMAP:MF_01217	PFAM:PD000887	PFAM:PF00550	EnsemblPlantsGene:PGSC0003DMG400001685
PGSC:PGSC0003DMG400001685	EnsemblPlants:PGSC0003DMT400004235	InterPro:PP-bd_ACP	ScanProsite:PS00012	PFscan:PS50075	PANTHER:PTHR20863
PANTHER:PTHR20863:SF41	InterPro:Ppantetheine_attach_site	SUPFAM:SSF47336	TIGRFAMs:TIGR00517	UniParc:UPI00029692F7	RefSeq:XP_006354636.1

Description

Acyl carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001685]

Coordinates

chr1:+:68412758..68416658

Molecular Weight (calculated)

13724.5 Da

IEP (calculated)

5.554

GRAVY (calculated)

-0.160

Length

122 amino acids

Sequence
(BLAST)

001: MASALRSAIL RHIRIPATHA LSANGSRLTA VRLMSSHDDH ITKDEVIKRV LDVVKCFPKV DPSKVTPEVH FEKDLGLDSL DTVEIVMALE EEFKLEIPDK
101: EAVRIESCEQ AIEYVYNHPM SS

Best Arabidopsis Sequence Match ( AT2G44620.1 )
(BLAST)

001: MALRNAILRH LRVPVQTLGL NQSKIGFLGT IRSFSSHDDH LSREAVVDRV LDVVKSFPKV DPSKVTPEVH FQNDLGLDSL DTVEIVMAIE EEFKLEIPDK
101: EADKIDSCSL AIEYVYNHPM SS

Arabidopsis Description

MTACP1Acyl carrier protein 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53665]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.