Factsheet for PGSC0003DMT400023399

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400002331
PGSC0003DMT400067082

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22910.1	PGSC0003DMT400002331	AT1G35670.1	19130088
AT2G22910.1	PGSC0003DMT400067082	AT1G35670.1	19130088
AT2G22910.1	PGSC0003DMT400002331	AT4G09570.1	19130088
AT2G22910.1	PGSC0003DMT400067082	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g043950.2.1	Tomato	plastid	98.18	98.18
PGSC0003DMT400055176	Potato	plastid	10.78	10.94
KRH28345	Soybean	plastid	7.3	7.25
CDY29574	Canola	plastid	6.97	7.0
AT2G22910.1	Thale cress	cytosol	6.97	6.9
KRH77140	Soybean	plastid	6.63	6.61
KRH04408	Soybean	plastid	6.14	6.16
GSMUA_Achr6P33530_001	Banana	plastid	5.8	5.84
CDX69319	Canola	plastid	5.8	5.68
AT4G37670.2	Thale cress	plastid	5.64	5.55
Bra011778.1-P	Field mustard	mitochondrion, plastid	5.64	5.54
CDX75668	Canola	mitochondrion, plastid	5.64	5.54
TraesCS3D01G274700.1	Wheat	endoplasmic reticulum, golgi	3.65	5.34
HORVU3Hr1G070270.2	Barley	cytosol	2.49	3.42
TraesCS7B01G136600.1	Wheat	plastid	2.82	2.78
EER94644	Sorghum	plastid	2.65	2.64
Zm00001d032612_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:00220+2.3.1.1	EntrezGene:102598178	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase
InterPro:Asp/Glu/Uridylate_kinase	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008080	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	InterPro:IPR000182	InterPro:IPR036393
UniProt:M1AIA0	HAMAP:MF_01105	InterPro:NAGS_kin	InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696
EnsemblPlantsGene:PGSC0003DMG400009061	PGSC:PGSC0003DMG400009061	EnsemblPlants:PGSC0003DMT400023399	PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF4
SUPFAM:SSF53633	SUPFAM:SSF55729	TIGRFAMs:TIGR01890	UniParc:UPI0002959263	RefSeq:XP_006350621.1	:

Description

N-acetyl-glutamate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400009061]

Coordinates

chr3:+:6831660..6841316

Molecular Weight (calculated)

66453.9 Da

IEP (calculated)

8.153

GRAVY (calculated)

-0.120

Length

603 amino acids

Sequence
(BLAST)

001: MSASPARPCA PVIKQCKLPI FARSDVWTTP VGNSFQGRRK LLSLRVNFSK RLSIRCGVYG ETESAAGFSD ESSAIKDDLF VGYFREAWPY FLAHRGSTFV
101: VLISAEIVDS PHLDHLLMDI SLLHGLGIKF VLVPGTHVQI DRFLAERGSE PKYVGRYRVT DPDSLMAAMD AAGRIRLMIE AKLSPGPSLT GVRRHGENSR
201: WHDGVSVASG NFLAMKRRGV VEGIDYAATG EVKKIDVSRI RERLDQDSIV LLSNLGYSSS GEVLNCNTYE VATACALALG AEKLICIIDG PILDESGRLI
301: RFLTLQAADM LVRKRAEQSE AAANYVKAVS QVDFNCLDHN GSNGSISSYN MNGFSQKYSV FQNGVGFDNG NGLWSSEQGF AIGGQERLSR LNGYLSELAA
401: AAFVCRGGVQ RVHLLDGTIG GVLLKELFQR DGVGTMVASD LYEGTRMARL SDIPEIKQLL QPLEESGTLI KRSEEELVEA LHSFIVVERE GHIIACAALF
501: PYFEEKCGEV AAIAVSPDCR GQGQGDKLLD YIEKKASSLG LQMLFLLTTR TADWFVRRGF SECSIDRIPA QKRKKINLSR RSKYYMKKLL PDRSGIRFDN
601: PFS

Best Arabidopsis Sequence Match ( AT2G22910.1 )
(BLAST)

001: MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI
101: SGDVLDGPYC DLVLKDIAFL HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL SPGPSIYNIR RHGDSSRLHE
201: TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF
301: LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL SPTFQNGVGF DNGNGLWSGE QGFAIGGEER ISRLNGYLSE
401: LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGNRE AKVEDLAGIR QIIKPLEESG ALVRRTDEEL LRALDSFVVV EREGHIIACA
501: ALFPFFEEKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS ALGLEMLFLL TTRTADWFVR RGFQECPIEM IPEARRERIN LSRRSKYYMK KLLPDRSGIS
601: VVRTFQYDS

Arabidopsis Description

NAGS1Probable amino-acid acetyltransferase NAGS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84JF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.