Factsheet for HORVU3Hr1G070270.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22910.1	HORVU4Hr1G019530.1	AT1G35670.1	19130088
AT2G22910.1	HORVU5Hr1G032550.3	AT1G35670.1	19130088
AT2G22910.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT2G22910.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G240100.2	Wheat	mitochondrion, plastid	98.18	71.71
TraesCS7B01G136600.1	Wheat	plastid	97.95	70.38
EER94644	Sorghum	plastid	88.84	64.46
Zm00001d048574_P001	Maize	plastid	73.58	44.61
AT4G37670.2	Thale cress	plastid	12.98	9.3
HORVU7Hr1G049140.1	Barley	plastid	7.74	5.62
AT2G22910.1	Thale cress	cytosol	4.78	3.45
Bra011778.1-P	Field mustard	mitochondrion, plastid	3.87	2.77
CDX75668	Canola	mitochondrion, plastid	3.87	2.77
CDX69319	Canola	plastid	3.87	2.76
PGSC0003DMT400023399	Potato	plastid	3.42	2.49
HORVU2Hr1G035970.1	Barley	mitochondrion, plastid	3.19	2.41
GSMUA_Achr6P33530_001	Banana	plastid	3.19	2.34
Solyc03g043950.2.1	Tomato	plastid	3.19	2.32
KRH77140	Soybean	plastid	2.96	2.15
KRH28345	Soybean	plastid	2.96	2.14

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase	InterPro:Asp/Glu/Uridylate_kinase
InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:HORVU3Hr1G070270	EnsemblPlants:HORVU3Hr1G070270.2	InterPro:IPR000182
InterPro:IPR036393	UniProt:M0YB00	HAMAP:MF_01105	InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696
PIRSF:PIRSF000423	PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF8	SUPFAM:SSF53633	SUPFAM:SSF55729
TIGRFAMs:TIGR01890	UniParc:UPI000295A6D8	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:531690427..531695683

Molecular Weight (calculated)

48528.0 Da

IEP (calculated)

7.467

GRAVY (calculated)

-0.270

Length

439 amino acids

Sequence
(BLAST)

001: MEAAGRIRLT IEAKLSPGPP MLDLRRHGVN GRWHEISDNV ASGNFLGAKR RGVVGGIDYG FTGEVKKIDV SRIKERLDRD SIVVVSNMGY SSAGEVLNCN
101: TYEVATACAL AIEADKLICV VDGQIYDEHG RVNRFMSIEE ADMLIRTRAK QSETAANYVK VVGEEDNSYA HNFPIKEEKE QVWVGRDFVS DYTASFRNGV
201: GFNNGNGLSG EQGFAIGGAE RLSRSNGYLS ELAAAAYVCH GGVQRVHIID GTVGGSLLLE LFTRDGAGTL IARDMYEGTR TAREEDFSGI RKIIRPLEES
301: GVLVQRTDKE LLEALKSFIV VERDGSVIAC AALFPFFEDK SGEVAAIAVS EECRGQGQGD KLLDYVEKKA LSLGLEKIFL LTTRTADWFV RRGFKECSME
401: SIPLKRRKRI NLSRGSKYYI KRLQPAEIRH MSANNFALK

Best Arabidopsis Sequence Match ( AT4G37670.2 )
(BLAST)

001: MERGALVGSS STSSYYVPYH FRQSKSNFSS FKPKNKLNPT QFRFNCSWFK PVSSITAAKC NMFDYAVTAA GDVEAEHPVD DKQFVRWFRE AWPYLWAHRG
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI

Arabidopsis Description

NAGS2NAGS2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1D0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.