CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22910.1	EES09373	AT1G35670.1	19130088
AT2G22910.1	EES16732	AT1G35670.1	19130088
AT2G22910.1	EES09373	AT4G09570.1	19130088
AT2G22910.1	EES16732	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G070270.2	Barley	cytosol	64.46	88.84
TraesCS7D01G240100.2	Wheat	mitochondrion, plastid	80.33	80.87
TraesCS7B01G136600.1	Wheat	plastid	80.66	79.87
Zm00001d048574_P001	Maize	plastid	77.69	64.92
AT4G37670.2	Thale cress	plastid	9.26	9.14
AT2G22910.1	Thale cress	cytosol	3.64	3.61
Bra011778.1-P	Field mustard	mitochondrion, plastid	3.14	3.09
CDX75668	Canola	mitochondrion, plastid	3.14	3.09
EER99616	Sorghum	plastid	3.14	3.04
CDX69319	Canola	plastid	2.81	2.76
GSMUA_Achr6P33530_001	Banana	plastid	2.64	2.67
PGSC0003DMT400023399	Potato	plastid	2.64	2.65
Solyc03g043950.2.1	Tomato	plastid	2.64	2.65
KRH28345	Soybean	plastid	2.48	2.47
KRH77140	Soybean	plastid	2.31	2.31

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	EntrezGene:8066237	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase
InterPro:Asp/Glu/Uridylate_kinase	UniProt:C5WVH9	EnsemblPlants:EER94644	ProteinID:EER94644	ProteinID:EER94644.1	InterPro:GNAT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004042	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006526	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	InterPro:IPR000182	InterPro:IPR036393	HAMAP:MF_01105	InterPro:NAGS_kin
InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696	PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF8
MetaCyc:PWY-5154	EnsemblPlantsGene:SORBI_3001G325700	SUPFAM:SSF53633	SUPFAM:SSF55729	unigene:Sbi.11457	TIGRFAMs:TIGR01890
UniParc:UPI0001A83122	RefSeq:XP_002467646.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:61259723..61267325

Molecular Weight (calculated)

65218.2 Da

IEP (calculated)

8.339

GRAVY (calculated)

-0.142

Length

605 amino acids

Sequence
(BLAST)

001: MAASLAAASA GSASARLAAA GEVPGSARPC CPGRLAAASF PCAGAGRRRR PAVGVRCGGG GGGSPAGAAA DAEEGGRFVG WFREAWPYIR GHRGSTFVVV
101: ISGEVVAGPH LDGILQDISL LHGLGIKFVL VPGTHVQIDK LLAERGKKAK YAGRYRITDS DSLDAAMEAA GRIRLTIEAK LSPGPPMLNL RRHGVNGRWH
201: EISDNVASGN FLGAKRRGVV GGIDYGFTGE VKKIDVSRIR ERLDRDSIVV VSNMGYSSAG EVLNCNTYEV ATACALSIEA DKLICIVDGQ IFDEHGRVNR
301: FMSIEEADML IRTRAKQSEI AANYVKVVDE EDINHVRYLP MKHDTEHSLN GRDNINGYTA SFRNGVGFNN GNGLSGEQGF AIGGEERLSR SNGYLSELAA
401: AAYVCHGGVQ RVHIVDGTVG GSLLLELFTR DGVGTMIARD MYEGTRMARE EDLSGIRKII RPLEESGVLV RRTDKELLEA LPSFIVVERD GSIIACAALF
501: PFLEDKSGEV AAIAVSEECR GQGQGDKLLD YVEKKALSLG LEKIFLLTTR TADWFVRRGF KECSIESLPL VRRKRIDLSR GSKYYMKRLQ AAEVGHMAVN
601: GFAMR

Best Arabidopsis Sequence Match ( AT2G22910.1 )
(BLAST)

001: MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI
101: SGDVLDGPYC DLVLKDIAFL HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL SPGPSIYNIR RHGDSSRLHE
201: TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF
301: LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL SPTFQNGVGF DNGNGLWSGE QGFAIGGEER ISRLNGYLSE
401: LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGNRE AKVEDLAGIR QIIKPLEESG ALVRRTDEEL LRALDSFVVV EREGHIIACA
501: ALFPFFEEKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS ALGLEMLFLL TTRTADWFVR RGFQECPIEM IPEARRERIN LSRRSKYYMK KLLPDRSGIS
601: VVRTFQYDS

Arabidopsis Description

NAGS1Probable amino-acid acetyltransferase NAGS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84JF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.