Factsheet for Solyc03g043950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g065380.2.1
Solyc11g018610.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22910.1	Solyc06g065380.2.1	AT1G35670.1	19130088
AT2G22910.1	Solyc11g018610.1.1	AT1G35670.1	19130088
AT2G22910.1	Solyc06g065380.2.1	AT4G09570.1	19130088
AT2G22910.1	Solyc11g018610.1.1	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023399	Potato	plastid	98.18	98.18
Solyc02g092260.2.1	Tomato	nucleus	10.95	11.11
KRH28345	Soybean	plastid	7.3	7.25
AT2G22910.1	Thale cress	cytosol	7.13	7.06
CDY29574	Canola	plastid	6.8	6.83
KRH77140	Soybean	plastid	6.63	6.61
KRH04408	Soybean	plastid	6.3	6.32
GSMUA_Achr6P33530_001	Banana	plastid	5.97	6.01
CDX69319	Canola	plastid	5.97	5.84
Bra011778.1-P	Field mustard	mitochondrion, plastid	5.8	5.7
CDX75668	Canola	mitochondrion, plastid	5.8	5.7
AT4G37670.2	Thale cress	plastid	5.47	5.38
TraesCS3D01G274700.1	Wheat	endoplasmic reticulum, golgi	3.65	5.34
HORVU3Hr1G070270.2	Barley	cytosol	2.32	3.19
EER94644	Sorghum	plastid	2.65	2.64
TraesCS7B01G136600.1	Wheat	plastid	2.65	2.62
Zm00001d032612_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase	InterPro:Asp/Glu/Uridylate_kinase
UniProt:C4NFG1	EMBL:FJ543466	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008080
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	InterPro:IPR000182
InterPro:IPR036393	HAMAP:MF_01105	InterPro:NAGS_kin	InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696
PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF4	SUPFAM:SSF53633	SUPFAM:SSF55729	EnsemblPlantsGene:Solyc03g043950.2
EnsemblPlants:Solyc03g043950.2.1	TIGRFAMs:TIGR01890	UniParc:UPI0001A4CB2A	:	:	:

Description

N-acetyl-glutamate synthase [Source:UniProtKB/TrEMBL;Acc:C4NFG1]

Coordinates

chr3:+:7743833..7753370

Molecular Weight (calculated)

66456.8 Da

IEP (calculated)

7.852

GRAVY (calculated)

-0.126

Length

603 amino acids

Sequence
(BLAST)

001: MSASPATPCA PVIKQCKLPI FARSDVWTTP VENSFQGRRK LLSLRVNFSK RLSIRCGVYG ETESAAGFSD VSSAIKDDLF IGFFREAWPY FLAHRGSTFV
101: VLISAEIVDS PHLDHLLMDI SLLHGLGIKF VLVPGTHVQI DRFLAERGSE PKYVGRYRVT DPDSLMAAMD AAGRIRLMIE AKLSPGPSLT GVRRHGENSR
201: WHDGVSVASG NFLAMKRRGV VEGTDYAATG EVKKIDVSRI RERLDQDSIV LLSNLGYSSS GEVLNCNTYE VATACALALG AEKLICIIDG PILDESGRLI
301: RFLTLQDADM LVRKRAEQSE AAANYVKAVS QEDFNCLGHN GSNGSISSYN MNGFSQKYSV FQNGVGFDNG NGLWSSEQGF AIGGQERLSR LNGYLSELAA
401: AAFVCRGGVQ RVHLLDGTIG GVLLKELFQR DGVGTMVASD LYEGTRMARL SDIPEIKQLL QPLEESGTLI RRSEEELVEA LHSFIVVERE GHVIACAALF
501: PYFEEKCGEV AAIAVSPDCR GQGQGDKLLD YIEKKASSLG LQMLFLLTTR TADWFVRRGF SECSIDRIPA QKRKKINLSR RSKYYMKKLL PDRSGIRFDN
601: PFS

Best Arabidopsis Sequence Match ( AT2G22910.1 )
(BLAST)

001: MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI
101: SGDVLDGPYC DLVLKDIAFL HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL SPGPSIYNIR RHGDSSRLHE
201: TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF
301: LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL SPTFQNGVGF DNGNGLWSGE QGFAIGGEER ISRLNGYLSE
401: LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGNRE AKVEDLAGIR QIIKPLEESG ALVRRTDEEL LRALDSFVVV EREGHIIACA
501: ALFPFFEEKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS ALGLEMLFLL TTRTADWFVR RGFQECPIEM IPEARRERIN LSRRSKYYMK KLLPDRSGIS
601: VVRTFQYDS

Arabidopsis Description

NAGS1Probable amino-acid acetyltransferase NAGS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84JF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.