Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G070270.2 | Barley | cytosol | 70.38 | 97.95 |
| TraesCS7D01G240100.2 | Wheat | mitochondrion, plastid | 95.25 | 96.84 |
| EER94644 | Sorghum | plastid | 79.87 | 80.66 |
| Zm00001d048574_P001 | Maize | plastid | 68.58 | 57.87 |
| AT4G37670.2 | Thale cress | plastid | 9.49 | 9.46 |
| TraesCS2B01G215900.1 | Wheat | mitochondrion, plastid | 3.93 | 4.12 |
| AT2G22910.1 | Thale cress | cytosol | 3.76 | 3.78 |
| Bra011778.1-P | Field mustard | mitochondrion, plastid | 3.27 | 3.26 |
| CDX75668 | Canola | mitochondrion, plastid | 3.27 | 3.26 |
| CDX69319 | Canola | plastid | 2.95 | 2.92 |
| PGSC0003DMT400023399 | Potato | plastid | 2.78 | 2.82 |
| GSMUA_Achr6P33530_001 | Banana | plastid | 2.62 | 2.67 |
| Solyc03g043950.2.1 | Tomato | plastid | 2.62 | 2.65 |
| KRH28345 | Soybean | plastid | 2.62 | 2.64 |
| KRH77140 | Soybean | plastid | 2.45 | 2.48 |
Protein Annotations
| KEGG:00220+2.3.1.1 | Gene3D:3.40.630.30 | MapMan:4.1.1.1.1.1 | InterPro:AceGlu_kinase-like_sf | InterPro:Acyl_CoA_acyltransferase | InterPro:Asp/Glu/Uridylate_kinase |
| InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004042 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006526 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR000182 | InterPro:IPR036393 | HAMAP:MF_01105 | InterPro:NAGS_kin |
| InterPro:NH2A_AcTrfase | PFAM:PF00583 | PFAM:PF00696 | PFscan:PS51186 | PANTHER:PTHR30602 | PANTHER:PTHR30602:SF8 |
| SUPFAM:SSF53633 | SUPFAM:SSF55729 | TIGRFAMs:TIGR01890 | EnsemblPlantsGene:TraesCS7B01G136600 | EnsemblPlants:TraesCS7B01G136600.1 | TIGR:cd04237 |
| TIGR:cd04301 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:168356868..168363178
Molecular Weight (calculated)
66277.2 Da
IEP (calculated)
8.300
GRAVY (calculated)
-0.211
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQSPLNLAC TPPMAAAASL ARAAGEPSRA PAGSTRPRPG SVAMRAPESW RRRATGVRCG GGAGLFGDGA LGGGEAGADE GGRFVGWFRE AWPYIRGHRG
101: STFVVVISGE VVAGPHLDGI LQDISLLHGL GIKFVLVPGT HVQIDKLLAD RGKKANYGGR YRITDSDSLD AAMEAAGRIR LTIEAKLSPG PPMLDLRRHG
201: VNGRWHEISD NVASGNFLGA KRRGVVGGID YGFTGEVKKI DVSRIKERLD RDSIVVVSNM GYSSSGEVLN CNTYEVATAC ALAIEADKLI CVVDGQIYDE
301: HGRVNRFMSI EEADMLIRTR AKQSETAANY VKVVGEEDIS YAHNFPIKEE KEQVWVGRDF VSDYTASFRN GVGFNNGNGL SGEQGFAIGG AERLSRSNGY
401: LSELAAAAYV CHGGVQRVHI IDGTVGGSLL LELFTRDGAG TLIARDMYEG TRTAREEDFS GIRKILRPLE ESGVLVQRTD KELLEALKSF IVVERDGSII
501: ACAALFPFFE DKSGEVAAIA VSEECRGQGQ GDKLLDYVEK KALSLGLEKI FLLTTRTADW FVRRGFKECS VESIPVKRRK RINLSRGSKY YIKRLQPAEI
601: GHMAANNFAM K
101: STFVVVISGE VVAGPHLDGI LQDISLLHGL GIKFVLVPGT HVQIDKLLAD RGKKANYGGR YRITDSDSLD AAMEAAGRIR LTIEAKLSPG PPMLDLRRHG
201: VNGRWHEISD NVASGNFLGA KRRGVVGGID YGFTGEVKKI DVSRIKERLD RDSIVVVSNM GYSSSGEVLN CNTYEVATAC ALAIEADKLI CVVDGQIYDE
301: HGRVNRFMSI EEADMLIRTR AKQSETAANY VKVVGEEDIS YAHNFPIKEE KEQVWVGRDF VSDYTASFRN GVGFNNGNGL SGEQGFAIGG AERLSRSNGY
401: LSELAAAAYV CHGGVQRVHI IDGTVGGSLL LELFTRDGAG TLIARDMYEG TRTAREEDFS GIRKILRPLE ESGVLVQRTD KELLEALKSF IVVERDGSII
501: ACAALFPFFE DKSGEVAAIA VSEECRGQGQ GDKLLDYVEK KALSLGLEKI FLLTTRTADW FVRRGFKECS VESIPVKRRK RINLSRGSKY YIKRLQPAEI
601: GHMAANNFAM K
001: MERGALVGSS STSSYYVPYH FRQSKSNFSS FKPKNKLNPT QFRFNCSWFK PVSSITAAKC NMFDYAVTAA GDVEAEHPVD DKQFVRWFRE AWPYLWAHRG
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI
Arabidopsis Description
NAGS2NAGS2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1D0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.