Factsheet for TraesCS7D01G240100.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22910.1	TraesCS4A01G206200.2	AT1G35670.1	19130088
AT2G22910.1	TraesCS4B01G109800.2	AT1G35670.1	19130088
AT2G22910.1	TraesCS4D01G107200.1	AT1G35670.1	19130088
AT2G22910.1	TraesCS5A01G107900.1	AT1G35670.1	19130088
AT2G22910.1	TraesCS5B01G115400.1	AT1G35670.1	19130088
AT2G22910.1	TraesCS5D01G122800.1	AT1G35670.1	19130088
AT2G22910.1	TraesCS4A01G206200.2	AT4G09570.1	19130088
AT2G22910.1	TraesCS4B01G109800.2	AT4G09570.1	19130088
AT2G22910.1	TraesCS4D01G107200.1	AT4G09570.1	19130088
AT2G22910.1	TraesCS5A01G107900.1	AT4G09570.1	19130088
AT2G22910.1	TraesCS5B01G115400.1	AT4G09570.1	19130088
AT2G22910.1	TraesCS5D01G122800.1	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G070270.2	Barley	cytosol	71.71	98.18
TraesCS7B01G136600.1	Wheat	plastid	96.84	95.25
EER94644	Sorghum	plastid	80.87	80.33
Zm00001d048574_P001	Maize	plastid	69.22	57.46
AT4G37670.2	Thale cress	plastid	9.65	9.46
AT2G22910.1	Thale cress	cytosol	3.83	3.78
TraesCS2D01G196900.1	Wheat	mitochondrion, plastid	3.49	3.62
TraesCS3D01G274700.1	Wheat	endoplasmic reticulum, golgi	2.33	3.4
Bra011778.1-P	Field mustard	mitochondrion, plastid	3.33	3.26
CDX75668	Canola	mitochondrion, plastid	3.33	3.26
CDX69319	Canola	plastid	3.0	2.92
GSMUA_Achr6P33530_001	Banana	plastid	2.66	2.67
KRH28345	Soybean	plastid	2.66	2.64
KRH77140	Soybean	plastid	2.5	2.48

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase	InterPro:Asp/Glu/Uridylate_kinase
InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	InterPro:IPR000182	InterPro:IPR036393	HAMAP:MF_01105	InterPro:NAGS_kin
InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696	PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF8
SUPFAM:SSF53633	SUPFAM:SSF55729	TIGRFAMs:TIGR01890	EnsemblPlantsGene:TraesCS7D01G240100	EnsemblPlants:TraesCS7D01G240100.2	TIGR:cd04237
TIGR:cd04301	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:204450276..204456464

Molecular Weight (calculated)

65558.3 Da

IEP (calculated)

8.720

GRAVY (calculated)

-0.238

Length

601 amino acids

Sequence
(BLAST)

001: MAAASLARAA ARFAGEPSRA PAGSTRPRPW RVGTRAPESR RRRATGVRCC GGAGLFGDGA LGRGEAEADE GGRFVGWFRE AWPYIRGHRG STFVVVISGE
101: VVAGPHLDGI LQDISLLHGL GIKFVLVPGT HVQIDKLLAD RGKKANYGGR YRITDSDSLD AAMEAAGRIR LTIEAKLSPG PPMLDLRRHG VNGRWHEISD
201: NVASGNFLGA KRRGVVGGID YGFTGEVKKI DVSRIKERLD RDSIVVVSNM GYSSSGEVLN CNTYEVATAC ALAIEADKLI CVVDGQIYDE HGRVNRFMSI
301: EEADMLIRTR AKQSETAANY VKVVGEEDIS YAHNFPIKEE KEQVWVGRDF VSDYTASFRN GVGFNNGNGL SGEQGFAIGG AERLSRSNGY LSELAAAAYV
401: CHGGVQRVHI IDGTVGGSLL LELFTRDGAG TLIARDMYEG TRTAREEDFS GIRKILRPLE ESGVLVQRTD KELLEALKSF IVVERDGSII ACAALFPFFE
501: DKSGEVAAIA VSEECRGQGQ GDKLLDYVEK KALSLGLEKI FLLTTRTADW FVRRGFKECS VESIPVKRRK RINLSRGSKY YIKRLQPAEI GHMAANNFAL
601: K

Best Arabidopsis Sequence Match ( AT4G37670.2 )
(BLAST)

001: MERGALVGSS STSSYYVPYH FRQSKSNFSS FKPKNKLNPT QFRFNCSWFK PVSSITAAKC NMFDYAVTAA GDVEAEHPVD DKQFVRWFRE AWPYLWAHRG
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI

Arabidopsis Description

NAGS2NAGS2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1D0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.