CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011778.1-P	Field mustard	mitochondrion, plastid	100.0	100.0
CDX69319	Canola	plastid	88.93	88.64
AT4G37670.2	Thale cress	plastid	43.97	44.05
KRH28345	Soybean	plastid	35.83	36.24
KRH77140	Soybean	plastid	35.67	36.2
CDX72647	Canola	mitochondrion	7.17	7.46
CDY29574	Canola	plastid	7.0	7.17
Solyc03g043950.2.1	Tomato	plastid	5.7	5.8
PGSC0003DMT400023399	Potato	plastid	5.54	5.64
Zm00001d048574_P001	Maize	plastid	4.89	4.14
HORVU3Hr1G070270.2	Barley	cytosol	2.77	3.87
TraesCS7D01G240100.2	Wheat	mitochondrion, plastid	3.26	3.33
TraesCS7B01G136600.1	Wheat	plastid	3.26	3.27
EER94644	Sorghum	plastid	3.09	3.14

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	GO:A0A078CKT5	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase
InterPro:Asp/Glu/Uridylate_kinase	EnsemblPlants:CDX75668	ProteinID:CDX75668	ProteinID:CDX75668.1	InterPro:GNAT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004042	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006526	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00121595001	InterPro:IPR000182	InterPro:IPR036393	HAMAP:MF_01105	InterPro:NAGS_kin	InterPro:NH2A_AcTrfase
PFAM:PF00583	PFAM:PF00696	PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF4	MetaCyc:PWY-5154
SUPFAM:SSF53633	SUPFAM:SSF55729	TIGRFAMs:TIGR01890	UniPathway:UPA00068	UniParc:UPI0002546423	:

Description

BnaA01g00340D

Coordinates

chrLK031804:-:2234480..2237061

Molecular Weight (calculated)

67733.8 Da

IEP (calculated)

7.481

GRAVY (calculated)

-0.234

Length

614 amino acids

Sequence
(BLAST)

001: MKRGASLGSA ASSNFYAPFQ FRQTRSEPSS FRPNNTLNPS KTRFSSPWFK PVRSLAAKCN MYEYAANAGR DVVEAEHPVD DKEFVRWFRE AWPYLWAHRG
101: CTFVVVISGE IINGPYCDPI LKDIAFLHHL GIRFVLVPGT QEQIDQLLSE RGREATYVGR YRVTDEASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DSSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLISFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSIT YHEPPNNNNT NGKDTYPHNG RPPFWGNGNH TPIFQNGVGF ENGNGLWSGE QGFAIGGEER
401: LSRLNGYLSE LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGTRD AKVDDLAGIR HIIKPLEESG ILVRRTDEEL LRALESFVVV
501: EREGQIIACA ALFPFFEDKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS SLGLEKLFLL TTRTADWFVR RGFQECSIEV IPETRRQRIN LSRKSKYYMK
601: KLLPDRSGIS VLRI

Best Arabidopsis Sequence Match ( AT4G37670.2 )
(BLAST)

001: MERGALVGSS STSSYYVPYH FRQSKSNFSS FKPKNKLNPT QFRFNCSWFK PVSSITAAKC NMFDYAVTAA GDVEAEHPVD DKQFVRWFRE AWPYLWAHRG
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI

Arabidopsis Description

NAGS2NAGS2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1D0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.